Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0936 GGTTACTTGGATCCAGAGTATTATATGTCTCAACAATTGACTGAGAAGAGTGACGTGTATAGCTTTGGTGTGCTAATGATGGAGCTGATATCTGCAAGAAAGCCATTGGAACGAGGGAAGTATATTGTGAAAGAGATTAGGAATGCACTGGATAAGACAAAAGGCTTATACGGTCTTCATGAATTTATTGATCCAGCCATTGGATTGTCGTCCACAACACTGATCGGTTTTGACAAGTTAGTGAATTTGGTCTTGAGATGTGTTGAAGAGTCAGGTGAAGAAAGGCCTAAAATGAGTGAAGTGGTAAGAGAAATTGAGAACATATTGAAGTCAGCTGGTACAAACCCTACTGAAGAATCACCCTCCATCTCTTCTAGCTATGAAGAGGTAAGCCGAGGGAGTTCCAGCCATCCTTATAACAGCAACGACACCTTTGATTTGAGTGCAGGGTCTCCATATCCAAAAGTTGACCCTGTGTAA 480 0.4167 GYLDPEYYMSQQLTEKSDVYSFGVLMMELISARKPLERGKYIVKEIRNALDKTKGLYGLHEFIDPAIGLSSTTLIGFDKLVNLVLRCVEESGEERPKMSEVVREIENILKSAGTNPTEESPSISSSYEEVSRGSSSHPYNSNDTFDLSAGSPYPKVDPV* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0936 159 MobiDBLite consensus disorder prediction 110 148 - -
Pvu3g0936 159 MobiDBLite consensus disorder prediction 109 159 - -
Pvu3g0936 159 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0936 159 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 146 - -
Pvu3g0936 159 Pfam Protein tyrosine and serine/threonine kinase 2 104 IPR001245 GO:0004672|GO:0006468
Pvu3g0936 159 SUPERFAMILY Protein kinase-like (PK-like) 1 141 IPR011009 -
Pvu3g0936 159 Gene3D Transferase(Phosphotransferase) domain 1 1 132 - -
Pvu3g0936 159 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0936 Pvu-Chr3 17854044 17855037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0936 1 158 Receptor kinase-like Gene Family AT5G49760 52.532 1.06e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pvu3g0936 PK_Tyr_Ser-Thr 8.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0936 - - pvu:PHAVU_003G0900001 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0936 3 17854044 17855037 Pvu6g1391 6 24799563 24806621 PCT