Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0934 ATGACGAAGGGTAACAATCAAATATCTCCGGCGGACGGCGTGGACGTGAGCGGCGGAAGCAAAGAGCAGCAGGCGGCGGGAGTGGGGATTCTCCTTCAGATAATGATGTTGGTTTTGTCTTTTGTGTTAGGTCACGTCCTTCGTCGCAAGAAGATTTACGTTCTTCCCGAAGCCAGCGCTTCTCTTCTCATTGGCTTGCTCGTTGGTACACTCGCTAACATTTCTCACACTCAAACTAGTATCAGAAACCTCACTTCCTCACTTTCTGCCAAACAGGGCGTGGTTCAACTTTCACGAGGAGTTTTTCTTCCTCTTCCTTTTACCTCCTATAATATTATATCCTTAACCACTCGCATTCTTCTATTCTTGTTTGCTTTTCCTTCATTTCATCACAATTACTCATTGCTTTCATTCCTTGACCTTCCGCTTTCGCTTTACTCAAAACCTTTTTTCTCTAATTTTGGAGCTATTGTTACATTTGCTATATTCGGCACCTTTCTGGCTTCCATTGTGACGGGTGTCTTGGTTTATCTTGGTGGATTGATGTACCTCATGTACAGATTACCTTTTGTTGAGTGTCTAATGTTTGGTGCACTGATATCCGCAACCGATCCTGTCACTGTTTTGTCCATATTTCAGGAGCTTGGCACGGATGTCAATCTATATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCTATTTCTTTGTACAGGACAATGACAGTGATTAAAACTCATCCATCTGGACAAAATTTCTTCATGGTGGTTGTTAGATTTTTAGAGACTTTTGTTGGGTCAATGTCTGCTGGTGTTGGAGTTGGATTTATATCTGCTTTACTATTTAAGTATTCAGGGTTGGATATTGACAATCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTTTTCCCGTATTTCTCGTACATGCTTGCTGAAGGTCTTGGACTGTCTGGTATTGTATCAATATTGTTCACAGGAATGGTCATGAAGCATTACACATTTTCAAATTTGTCACGTAGTTCTCAAAGATTCGTCTCTTCTTTTTTTGAGTTGATATCATCATTAGCTGAGACATTTGTATTTATCTACATGGGCTTTGATATTGCTATGGAGAAACATAGCTGGTCGCATGTTGGATTTATATTCTTTTCCATTATATTCATTGGAATTGCAAGGGCCGTCAATGTGTTCTCATGTGCTTATTTGGTCAACTTGGTCAGACCTGCCTATCGACAAATTCCGCGAAAACACCAGAAAGCTCTTTGGTATAGTGGACTTAGAGGGGCAATGGCGTTTGCCCTTGCACTGCAATCAATTCATGATCTGCCAGATGGACATGGACAGACCATCTTAACTGCAACTACTGCAATAGTTGTTTTGACGGTATTACTGATTGGTGGTTCAACAGGCACCATGCTGGAAGCTTTACAAGTTGTAGGTAGCGACAGTCCTATCATCGAGAGTCCTTTGGCTTCACTTACCAGAACGAATTTCGAGGGCAACAATGGTTATTTTTCTCCTGATGATGAAGAACCATCATCGGGGAACAAAATCAAGATGAAGCTACAAGAATTCCAAAGAAGTGCTGCATCTTTTACAGCATTAGATAAAAACTACCTCACCCCATTCTTCACTAGTCAAAATGAAGATGAAGCTATGCCCCTGACTTCGGAGAACATGGGATTGGATGACCTTGACAATTACTCGTCATGA 1719 0.413 MTKGNNQISPADGVDVSGGSKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYVLPEASASLLIGLLVGTLANISHTQTSIRNLTSSLSAKQGVVQLSRGVFLPLPFTSYNIISLTTRILLFLFAFPSFHHNYSLLSFLDLPLSLYSKPFFSNFGAIVTFAIFGTFLASIVTGVLVYLGGLMYLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMTVIKTHPSGQNFFMVVVRFLETFVGSMSAGVGVGFISALLFKYSGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGMVMKHYTFSNLSRSSQRFVSSFFELISSLAETFVFIYMGFDIAMEKHSWSHVGFIFFSIIFIGIARAVNVFSCAYLVNLVRPAYRQIPRKHQKALWYSGLRGAMAFALALQSIHDLPDGHGQTILTATTAIVVLTVLLIGGSTGTMLEALQVVGSDSPIIESPLASLTRTNFEGNNGYFSPDDEEPSSGNKIKMKLQEFQRSAASFTALDKNYLTPFFTSQNEDEAMPLTSENMGLDDLDNYSS* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0934 572 Gene3D - 190 242 - -
Pvu3g0934 572 PANTHER SODIUM/HYDROGEN EXCHANGER 6 15 553 - -
Pvu3g0934 572 PANTHER SODIUM/HYDROGEN EXCHANGER 15 553 IPR018422 GO:0006812|GO:0015299|GO:0016021
Pvu3g0934 572 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 140 485 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu3g0934 572 MobiDBLite consensus disorder prediction 550 572 - -
Pvu3g0934 572 Pfam Sodium/hydrogen exchanger family 143 476 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Pvu3g0934 572 PRINTS Na+/H+ exchanger signature 142 156 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu3g0934 572 PRINTS Na+/H+ exchanger signature 157 165 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu3g0934 572 PRINTS Na+/H+ exchanger signature 197 207 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0934 Pvu-Chr3 17726627 17735834 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0934 20 478 Antiporters AT3G05030 28.690 4.52e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0934 K14724 - gmx:100810105 819.305