Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0909 ATGGATGAACAATTGAGGTTGCTAAGAGTCATTGTTGTGAAAGGGAAAAGATTAGTTATCCGGGATTTCAAGAGCAGTGACCCTTATGTTGTTGTCAAGCTGGGGAATCAGACAGCAAAGACCAGGGTCATCCACTGTTCCTTGAATCCTGTTTGGAATGAAGAGCTGAATTTCACTCTGACTGAACCTTCTGGACTTCTGAATTTGGAAGTGTTTGACAGAGATTTTTTGAAGGCTGATGACAAGATGGGGAGTAGTTATCTGAGCCTTCAACCATTGATGTCTGCGTCTAGATTAAGAGATATTTTGAAGCTGTCCTCTGCATCTGGTGAGACAACATTGAGGAAGGTGACACCAGACAGTGAAAATTGTCTTGCCCGTGAAAGCAGTATCACTTGTGTTAATGGTGAAGTGGTACAAAATGTTTGGTTAAGGCTTCTTGGGGTTGAGTCTGGGGAGCTACAATTGACTATCAAGTTCATAACTTCCTTAAATTAG 498 0.4177 MDEQLRLLRVIVVKGKRLVIRDFKSSDPYVVVKLGNQTAKTRVIHCSLNPVWNEELNFTLTEPSGLLNLEVFDRDFLKADDKMGSSYLSLQPLMSASRLRDILKLSSASGETTLRKVTPDSENCLARESSITCVNGEVVQNVWLRLLGVESGELQLTIKFITSLN* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0909 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Pvu3g0909 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Pvu3g0909 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 161 IPR035892 -
Pvu3g0909 165 Gene3D C2 domain 1 118 IPR035892 -
Pvu3g0909 165 PRINTS C2 domain signature 22 34 IPR000008 -
Pvu3g0909 165 PRINTS C2 domain signature 46 59 IPR000008 -
Pvu3g0909 165 PRINTS C2 domain signature 67 75 IPR000008 -
Pvu3g0909 165 SMART C2_3c 7 102 IPR000008 -
Pvu3g0909 165 CDD C2_ArfGAP 7 152 - -
Pvu3g0909 165 Pfam C2 domain 8 101 IPR000008 -
Pvu3g0909 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0909 Pvu-Chr3 15554102 15555507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0909 1 161 C2H2 Transcription Factor Family AT4G21160 40.741 1.17e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0909 - - gmx:100798217 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0909 3 15554102 15555507 Pvu6g1441 6 25313402 25316408 PCT