Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0899 ATGGGTAATGTGAACGTGCGTGGTTCTGAAGAAGAAGCAGAAGAAGCTTCTGCTGATGGGAACACCATGCCTCACTCCCCTCCCACCATCTCTCCCTTCGTCTTCTCTCCTCAGCTTCCTGTGGTTCCGCTACAAACACATGAGGAGATGCATGTTCCCAGTTATTCCTCGATGGAGACAACTTCAGGGTATGAAGATATGTTCAGTGATCTGGGAATTCCAACTATGGTTACTTGGAGTTATGGTGGAAAGGAAGTAGCTGTGGAGGGATCGTGGGATAATTGGAAAACCAGAATGCCCCTACAGAGATCAGGGAAAGACTTTGCAGTAATGAAGGTATTGCCATCTGGGGTTTATCAGTACAGATTTATTGTGGATGGACGGAGGAGGTATACTCCAGACTCGCCTTGGGCCCATGATGATGCCGGGAATGCTTACAACATCTTGGACTTACAGGATTATGTTCCTGAAGATATTGGAAGCATTTCTAGTTTTGAGCCTCCTCAATCACCTGAGTCAAGTTATGATAACTTACAGCTTAGTTCTGAAGATTATGCTAAGGAGCCACCGTTGGTTCCTCCACTCTTGCAAATGACACTGCTAAATGTGCCTGGAACAAATATAGAAATTCAACATCCTCTGTCAAGACCTCAACATGGAGTGCTGAATCATCTTTACACGCAGAAAGGAAAGAGCAGTCCTACAGTTGTTGGCCTTGGTACAACTCATCGGTTTCTAGCCAAATATGTCACTGTGGTGCTGTACAAGTCGTTGTAA 777 0.453 MGNVNVRGSEEEAEEASADGNTMPHSPPTISPFVFSPQLPVVPLQTHEEMHVPSYSSMETTSGYEDMFSDLGIPTMVTWSYGGKEVAVEGSWDNWKTRMPLQRSGKDFAVMKVLPSGVYQYRFIVDGRRRYTPDSPWAHDDAGNAYNILDLQDYVPEDIGSISSFEPPQSPESSYDNLQLSSEDYAKEPPLVPPLLQMTLLNVPGTNIEIQHPLSRPQHGVLNHLYTQKGKSSPTVVGLGTTHRFLAKYVTVVLYKSL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0899 258 Gene3D - 161 258 - -
Pvu3g0899 258 MobiDBLite consensus disorder prediction 1 30 - -
Pvu3g0899 258 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 186 256 IPR006828 GO:0005515
Pvu3g0899 258 Gene3D Immunoglobulins 69 155 IPR013783 -
Pvu3g0899 258 Pfam Glycogen recognition site of AMP-activated protein kinase 73 152 IPR032640 -
Pvu3g0899 258 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2 9 258 - -
Pvu3g0899 258 CDD E_set_AMPKbeta_like_N 74 150 - -
Pvu3g0899 258 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 9 258 IPR043554 -
Pvu3g0899 258 SMART AMPKBI_2 168 258 IPR006828 GO:0005515
Pvu3g0899 258 SUPERFAMILY AMPKBI-like 155 257 IPR037256 -
Pvu3g0899 258 SUPERFAMILY E set domains 73 158 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0899 Pvu-Chr3 14864679 14867841 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0899 K07199 - gmx:100805688 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0899 3 14864679 14867841 Pvu6g1455 6 25465139 25468158 PCT