Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0891 ATGGGTGGAGATGAGGCTCGAGAATCATTGCTTTCAGAACATTCCAATGAGAAAAATGACCTTGACAGGAGAAAGCCTAGTGGTAATGGTTCGGAGAAGGAGATCAACCTCAAAGGAAAAAATGATGAGCAAAAGGCTTTGCATCCTCAATGTATAGATGCAAAATCACAAGCAGAATTCAATTTCAAGGCAGTCTTCTTATGGTTAGCTGCATACCTAGGGGGAGGAACTATTTGCTTCCTTCTCACAGATCATGAGATAAAGGGCATAAAAACCAATGGGTTTCTTGATGCCATTTACTTCTGTGTTGTAACAATGACAACAGTTGGATATGGAGATCTTGTGCCAGATAGCCAAGTGTCAAAACTTCTTGCTTGCATTTACGTCTTCACTGGAATGGCTCTTGTAGGGCTAATTCTTAGCAAGGCAGCAGATTATATTGTTGAAAAGCAGGAACTCAACCTAGTTAAAACCTTATTCAAGGGTGCAAATTTTGGTTCACAAGAGCTTTCCAAAGAGGTTGAAACCAACAAAGCTAAATACAAATTCATCCTGACAGCATCCATCTTTTTGGTGCTTATGATTGTGGGGACTATTTTTCTTTATTTTATTGAAAATCTAGATTTTGTTGATGCCCTTTATTGTGTTTGTTCCACAGTCACCACTTTAGGTTATGGGGATAAGAGCTTTTCCACTACGGTTGGTCGTGCTTTTGCTGTGTTCTGGATATTGAGCAGCACCATTTGCTTAGCTCAGTCTTTTGCTTATCTTGCTGAACTTTATACTGAAAAAAGACAGAGATCCCTGGCAAAAATGGTTCTTGCACGAAAATTGTCACTCCTTGATCTTGAGGCAGCTGATCTCGATGGAGATCATGTAGTCAGTGCTACAGAGTTCGTTTTGTATAAGTTGAAAGAAATGGGAAAGATCAGCCAAGAGGATATTTTAGTTGTTATGGATATTTTTAGACAACTAGATTTTGATCAATCAGGAACCCTGACAGAAGCGGATCTCAGATAA 1020 0.3931 MGGDEARESLLSEHSNEKNDLDRRKPSGNGSEKEINLKGKNDEQKALHPQCIDAKSQAEFNFKAVFLWLAAYLGGGTICFLLTDHEIKGIKTNGFLDAIYFCVVTMTTVGYGDLVPDSQVSKLLACIYVFTGMALVGLILSKAADYIVEKQELNLVKTLFKGANFGSQELSKEVETNKAKYKFILTASIFLVLMIVGTIFLYFIENLDFVDALYCVCSTVTTLGYGDKSFSTTVGRAFAVFWILSSTICLAQSFAYLAELYTEKRQRSLAKMVLARKLSLLDLEAADLDGDHVVSATEFVLYKLKEMGKISQEDILVVMDIFRQLDFDQSGTLTEADLR* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0891 339 Pfam Ion channel 189 261 IPR013099 -
Pvu3g0891 339 Pfam Ion channel 69 148 IPR013099 -
Pvu3g0891 339 Gene3D - 44 161 - -
Pvu3g0891 339 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 18 337 - -
Pvu3g0891 339 ProSitePatterns EF-hand calcium-binding domain. 287 299 IPR018247 -
Pvu3g0891 339 SUPERFAMILY Voltage-gated potassium channels 176 277 - -
Pvu3g0891 339 PRINTS Two pore domain K+ channel signature 104 132 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pvu3g0891 339 PRINTS Two pore domain K+ channel signature 221 230 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pvu3g0891 339 Gene3D - 261 339 - -
Pvu3g0891 339 Gene3D - 164 260 - -
Pvu3g0891 339 ProSitePatterns EF-hand calcium-binding domain. 326 338 IPR018247 -
Pvu3g0891 339 SUPERFAMILY EF-hand 284 339 IPR011992 -
Pvu3g0891 339 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 18 337 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pvu3g0891 339 SUPERFAMILY Voltage-gated potassium channels 60 149 - -
Pvu3g0891 339 MobiDBLite consensus disorder prediction 1 39 - -
Pvu3g0891 339 ProSiteProfiles EF-hand calcium-binding domain profile. 313 339 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0891 Pvu-Chr3 14637743 14638961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0891 43 338 Ion Channels AT5G55630 57.095 1.03e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0891 K05389 - gmx:100799492 551.977