Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0887 ATGGATTTCCAACCTTCCTTACTGGTTTTTGCCCCATTCCTCTTGTTGCTGTTCTGGTTTACTAGGATTTACAAGAACAAAATCACAGTGAAGAGCGTGGTTCATAAGCTTCCCCCAGGCCCATGGAAGTTGCCTGTAATAGGCAACCTTCACCAACTGGCAAGGGCAGACACACTTCCACACCATACCCTTCAAAGTCTATCACACAAATACGGACCTCTGATGCACCTTCAACTGGGTGAAATTTCTGCTGTGATTGTGTCATCCCCTGACATGGCAAAGGAGATAATGAAGACACATGATCTTAATTTTGTGCAGAGGCCACAACTACTTTGTCCTAAAATCCTGGCCTATGGATCAACCGATATTGCCTTTGCTCCATACGGCGAGTACTGGAGACAGATGAGGAAAATATGTACACTAGAGCTTCTTAGTGCCAAAAGGGTTCACTCTTTCTCCTTCATTCGTGAAGAAGAGGTGGCTAAGCTCATACGATCCATTCAATTGTGTGCATGTGCAGGTTCACAAGTTAATGTTTCTGAGAATGTTTTTTCTTTTCTGAGCACCCTTGTTTCAAGGACAGCCTTTGGTAAAAAATCTGAGAAGGGGAATGAACTTCTGTGTTTGCTCAAGAAAGGAGCGGAACTCGCAGGAGGGTTTGACCTTGCTGATTTGTTCCCTTCATTGAAAGCTGTTCATTTCTTAACTAGGATGAAAACTAAGCTGGAGAACATGCATAAAGAACTGGACAAGATTTTAGAAAGTATCATCAGCGAGCATCAATCAAAGCATAGAAACGGAGATGCAGAAGAAAATCTGGTTGATGTTCTTTTGCGCGTGCAGCAAAGTGCCACCCTGGAGGTTCCACTCACAATTAACAACATCAAAGCCGTTATATGGGACATATTCGGGGCAGGGACGGATACTTCGGCAACAGTACTAGAGTGGGGTATGTCAGAGCTGTTGAAAAACCCAAGAGTGATGAAAAAAGCACAGGTTGAAATAAGAGAAGCTTTTAGGGGAAAGAAAAGAATTGGTGAGAGTGAGGTATATGAACTAAGCTACTTGAAGTTGGTGATCAAAGAAACTTTAAGGTTACATCCACCTGTTCCTCTATTGCTCCCAAGAGAATGCAGGGATTCATGCAAGATAGGTGGATATGATATACCTAGGAAGACTAAAGTGATAATAAATGCATGGGCACTTGGAAGAGATCCCAAGCATTGGTATGATGCTCAGAAGTTTATACCTGAGAGATTTGATGGCACTGGTTTTGATTTTAAAGGGAATAATTTTGAGTACATTCCTTTTGGGGCAGGGAGGAGAATTTGTCCTGGAATTTTACTTGGCTTAGCTAATGTTGAACTTCCTCTGGCTGCATTGCTCTATCACTTTGACTGGAAACTACCCAATGGAATGAAACCACAGGACTTGGATATGACAGAAGCCTTTGGAGCTACAGTGGGAAGAAAAAACAACCTTTATCTCATACCAACTCTGTATGACTATTCCCTTAATCATGCCATCACCACATGA 1536 0.4238 MDFQPSLLVFAPFLLLLFWFTRIYKNKITVKSVVHKLPPGPWKLPVIGNLHQLARADTLPHHTLQSLSHKYGPLMHLQLGEISAVIVSSPDMAKEIMKTHDLNFVQRPQLLCPKILAYGSTDIAFAPYGEYWRQMRKICTLELLSAKRVHSFSFIREEEVAKLIRSIQLCACAGSQVNVSENVFSFLSTLVSRTAFGKKSEKGNELLCLLKKGAELAGGFDLADLFPSLKAVHFLTRMKTKLENMHKELDKILESIISEHQSKHRNGDAEENLVDVLLRVQQSATLEVPLTINNIKAVIWDIFGAGTDTSATVLEWGMSELLKNPRVMKKAQVEIREAFRGKKRIGESEVYELSYLKLVIKETLRLHPPVPLLLPRECRDSCKIGGYDIPRKTKVIINAWALGRDPKHWYDAQKFIPERFDGTGFDFKGNNFEYIPFGAGRRICPGILLGLANVELPLAALLYHFDWKLPNGMKPQDLDMTEAFGATVGRKNNLYLIPTLYDYSLNHAITT* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0887 511 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 501 - -
Pvu3g0887 511 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g0887 511 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g0887 511 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g0887 511 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g0887 511 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g0887 511 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g0887 511 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g0887 511 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g0887 511 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g0887 511 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g0887 511 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g0887 511 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g0887 511 Coils Coil 235 255 - -
Pvu3g0887 511 Pfam Cytochrome P450 38 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g0887 511 Gene3D Cytochrome P450 30 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g0887 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Pvu3g0887 511 SUPERFAMILY Cytochrome P450 38 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g0887 511 PANTHER CYTOCHROME P450 71B11-RELATED 8 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0887 Pvu-Chr3 14608610 14610388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0887 35 501 Cytochrome P450 AT3G26300 44.654 2.62e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0887 - - gmx:100794503 855.514