Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0883 ATGCAAACGTCTCAGAAACACCCAAGTTCGGCTGGTGTACACTTCTATCACCACCAGCCTGTGCGAGGCATTTATCAAGTGTTGAAAAGCGATCTATGCCATGATGGCCGTGATAGCAGCAGCCAGGGAACTAGCGTTTCTTTTGAAACCTGCAAGCAGCAATACTTTACTCTGGAATCATGCCCTGCACCCACTACTGGTTTCTTGGACTGTGATGATTCTCCTTCCTATGCCAGTGTATCATCTAAAAGGAGTCCATTTTCTCCACAAGGTTCTCAGTCTTGCTATTCAGATCACCACCCTTCCTCTGACAACACCTATGGATCGCCAATAAGCGGTTTGTCTAGCGTTGATGATGGGCATGAACTGAAGCACAAACTTAGAGAACTGGAGATTTCATTGTTGGGGCCTGAGGAATTGGACATTGTAGACAGTTTTGGCTGCTGCGCCAAGGGTAGCAGACTCTACGGAGCATCTCAGTTGGCTAAACATAACTGGGATGACATTGCTGATAATATTTCAGGATTTGACCTGAAAGGAGTCTTCAGGTTATGTGCACAGGCCGTGTCTGATGATGATATTCCAACAGCAAGAGGGTGGATGGATAATGTATTGGGAAAAATGGTATCAGTCTCTGGAGATCCGATTCAGAGGTTGGGTTCTTACTTGTTGGAGGGGCTTAGAGCAAGGTTGGAATCATCAGGGGATCTCATCTACAAATCCTTGAAGTGTGAACAACCAACAAGCAAAGAACTAATGAGTTACATGCACATCCTGTACCAGATTTGCCCATACTGGAAGTTTGCATACATATCTGCAAATGCTGTCATATTAGAAGCTATGGCTAATGAGTCCAGGATTCATATAATGGATTTCCAAATAGCGCAGGGCAGACAGTGGTATTTACTTATCCAGGCTCTTGCACATAGGCCTGGGGGACCCCCTTCCCTTCGCGTAACCGGTGTTGATGATTCGCAGTCGTTTCATGCTCGAGGTGGAGGACTTGAGATTGTAGGAGAAAGTTTGTCAGAATTTGCCAGGTCTTGTGGAGTTCCGTTTGAATTCCACAGTGCTGCAATGTCTGGCTGTGAGGTTGTGCGAGGAAATGTTGAAATTCGACCTGGGGAAGCTCTGGCTGTAAATTTTCCTTTTGTTTTGCACCACTTGGCAGATGAGAGTGTGAGCACTGAGAATCACAGAGATAGATTGTTGAGGTTGGTTAAGAGCTTGTCTCCCAAGGTTGTTACCCTTGTCGAGCAAGAATCCAATACCAACACATCTCCTTTCTTTTCCAGGTTTCTTGAGACCCTGGATTATTACACTGCCATGTTTGAATCCATAGATGTGGCTTGCCCCAGAGATGATAAGAAGCGGATTAGCGCAGAGCAGCACTGTGTGGCTCGAGACATTGTTAACATGATAGCTTGTGAGGGGGTTGAGAGGGTGGAGAGGCATGAACTTTTGGGAAAGTGGAGGTCAAGACTTTCCATGGCTGGATTTAAACAGTGCCAATTGAGTTCTTCGGTGATGGTTGCTACCCAAAATCTCCTAAACGACTTCAGTCAAAATTACAGGCTTGAACATAGAGATGATGCCCTTTATCTTGGTTGGATGAACAGACATATGGCCACTTCTTCTGCTTGGAGGTGA 1650 0.457 MQTSQKHPSSAGVHFYHHQPVRGIYQVLKSDLCHDGRDSSSQGTSVSFETCKQQYFTLESCPAPTTGFLDCDDSPSYASVSSKRSPFSPQGSQSCYSDHHPSSDNTYGSPISGLSSVDDGHELKHKLRELEISLLGPEELDIVDSFGCCAKGSRLYGASQLAKHNWDDIADNISGFDLKGVFRLCAQAVSDDDIPTARGWMDNVLGKMVSVSGDPIQRLGSYLLEGLRARLESSGDLIYKSLKCEQPTSKELMSYMHILYQICPYWKFAYISANAVILEAMANESRIHIMDFQIAQGRQWYLLIQALAHRPGGPPSLRVTGVDDSQSFHARGGGLEIVGESLSEFARSCGVPFEFHSAAMSGCEVVRGNVEIRPGEALAVNFPFVLHHLADESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFSRFLETLDYYTAMFESIDVACPRDDKKRISAEQHCVARDIVNMIACEGVERVERHELLGKWRSRLSMAGFKQCQLSSSVMVATQNLLNDFSQNYRLEHRDDALYLGWMNRHMATSSAWR* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0883 549 MobiDBLite consensus disorder prediction 80 112 - -
Pvu3g0883 549 Pfam GRAS domain family 185 549 IPR005202 -
Pvu3g0883 549 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 16 548 - -
Pvu3g0883 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 16 548 IPR005202 -
Pvu3g0883 549 ProSiteProfiles GRAS family profile. 169 549 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0883 Pvu-Chr3 14385778 14389474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0883 1 549 GRAS Transcription Factor Family AT4G17230 59.528 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu3g0883 GRAS 5.3e-122 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0883 - - gmx:100776109 990.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0883 3 14385778 14389474 Pvu6g1476 6 25588679 25592386 PCT