Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0854 ATGAAAGCTTCAAAGCAGCAGAAGCAGAATCAGGTCCAACAAAGAGGATGCAAGGCCTTGTGTTGCAGCTGCAGGTTCAGTGTTTCTTCTTCTGAAGAAGCAGAAAGCTCAGCCTCCGATAGGTTCCCTTCTGTTTCAAGCCTTGCACATGCCATGGTGCAAGAGAGACTTGACCAAATTATTAGAGAAAGGATGGAAGCTAGTCATGCAGAGAGAAGAAGACAGCAGAGCAGAGAAGGGACCAAGTTTGTTGTAATGGTAGCAATGGAGAAGAGCTCTTATGATCCAAGAGTAGATTTTAGAGAGTCCATGATGGAGATGATAACTGCCAACCGCCTTCAAGACGCCAAAGATCTTCGTAGTCTATTGAACTATTATATCTCCATGAACGCTACTGAGTACCACAGTCTTATACTTGAGCTTTTTCATGAGGTTTGTACTAATTTGTTCTTACCATGCAAATGTCATTGGTAA 474 0.4283 MKASKQQKQNQVQQRGCKALCCSCRFSVSSSEEAESSASDRFPSVSSLAHAMVQERLDQIIRERMEASHAERRRQQSREGTKFVVMVAMEKSSYDPRVDFRESMMEMITANRLQDAKDLRSLLNYYISMNATEYHSLILELFHEVCTNLFLPCKCHW* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0854 157 Pfam Transcriptional repressor, ovate 93 150 IPR006458 -
Pvu3g0854 157 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 12 153 IPR038933 GO:0045892
Pvu3g0854 157 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 87 150 IPR006458 -
Pvu3g0854 157 ProSiteProfiles OVATE domain profile. 89 148 IPR006458 -
Pvu3g0854 157 PANTHER TRANSCRIPTION REPRESSOR-RELATED 12 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0854 Pvu-Chr3 13237376 13238106 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pvu3g0854 Ovate 3.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0854 - - var:108330150 274.248