Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0812 ATGGGTTGTCACGGCAGCAAGGAGAAAAAATCAAACGCAGAATTCAGCAGTGCCTATGGATCAGGCAGTGCTGGTCACAATACTGTTCAACAACCATCTACCACCACTGTTGCACAGGTTCAAACATCACCACCACCCAAACCACAACCACATTCAGAGGCGGTAGCGAGTCCACCAAAACCGAAACTTTCTCCGACCCAGAATGCCAGGGCGGTGCAGAAACCCGACGCCACGATTCTGGGGAAACCCTTTGAGGATATAAAGAAGTACTACAGTCTGGGGAAGGAACTGGGAAGAGGGCAATTCGGTATAACGTATCTGTGCACGGAGAATGCGACCGGAATGACTTACGCTTGCAAGTCGATTCTGAAGAGGAAGCTGGTGTCGAGAGCGGACAGGGAGGACATGAAGAGGGAGATTCAGATCATGCAGCATTTGTCTGGGCAGAACAACATTGTGGAGTTCAAGGGGGCGTTCGAGGACAGGATGTCGGTCCACCTTGTAATGGAACTCTGCGCCGGCGGGGAGCTCTTCGACCGGATCATCGCCCAAGGCCACTACTCCGAGAGAGCCGCCGCCTCACTCTGCCGCGCCATGGTCAACGTTGTTAACATTTGCCATTTCATGGGAGTCTTACACCGCGATCTCAAGCCCGAAAATTTTCTGCTCTCTACTAAGGATGACGATGCTACGCTCAAGGCTACTGATTTTGGACTCTCTGTCTTCATTGAAGAAGGGAAGGTATATCATGATATGGTTGGCAGTGCTTACTATGTTGCTCCCGAGGTATTGCGTCGTAGTTATGGAAAGGAAATAGATATTTGGAGTGCAGGCGTCATATTGTATATTCTTCTCAGTGGTGTACCACCTTTTTGGGCTGAAACTGAAAAGGGAATATTTAACGCCATATTGGAAGGTGAACTTGATTTTGTAAGTGAACCATGGCCATCCATATCAGACAGTGCTAAAGATCTAGTCAGGAAGATGTTGACACAAGATCCAAAGAAGCGGATTACTTCTGCGCAAGTCCTTGAACACCCATGGATGAGAGAAGGCGGAGAGGCATCCGATAAACCAATTGACAGTGCAGTTCTATCCAGAATGAAACAATTCAGGGCAATGAATAAGCTCAAGAAGCTAGCATTGAAGGTTATTGCTGAAAATCTATCAGAAGAGGAGATTAAAGGTCTGAAAGCAATGTTTGCAAATATGGACACTGACAACAGTGGCACAATTACCTACGAAGAATTGAAGACTGGCTTGGCTCGAATTGGATCAAGGTTGTCCGAGGCTGAAGTGAAGCAACTCATGGAGGCTGCTGATGTTGATGGAAATGGGTCAATTGACTATCTTGAATTCATTTCGGCTACAATGCATAGGCACAGACTTGAACGTGATGAACATCTTTACAAAGCATTCCAGTATTTTGATAAGGATAACAGTGGGTACATTACTAGAGATGAATTGGAGACTGCTATGACCCAACATGGAATGGGTGATGAAGCAACAATAAAGGAAATAATATCTGAGGTGGATACAGATAATGATGGAAGAATAAACTATGAGGAATTTTGTGCAATGATGAGAAGTGGAATGCCACACCAGGGAGGGTCAACCACTTTAAATCCACTGATGGGTTGA 1641 0.4607 MGCHGSKEKKSNAEFSSAYGSGSAGHNTVQQPSTTTVAQVQTSPPPKPQPHSEAVASPPKPKLSPTQNARAVQKPDATILGKPFEDIKKYYSLGKELGRGQFGITYLCTENATGMTYACKSILKRKLVSRADREDMKREIQIMQHLSGQNNIVEFKGAFEDRMSVHLVMELCAGGELFDRIIAQGHYSERAAASLCRAMVNVVNICHFMGVLHRDLKPENFLLSTKDDDATLKATDFGLSVFIEEGKVYHDMVGSAYYVAPEVLRRSYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFNAILEGELDFVSEPWPSISDSAKDLVRKMLTQDPKKRITSAQVLEHPWMREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFANMDTDNSGTITYEELKTGLARIGSRLSEAEVKQLMEAADVDGNGSIDYLEFISATMHRHRLERDEHLYKAFQYFDKDNSGYITRDELETAMTQHGMGDEATIKEIISEVDTDNDGRINYEEFCAMMRSGMPHQGGSTTLNPLMG* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0812 546 CDD EFh 471 529 IPR002048 GO:0005509
Pvu3g0812 546 Gene3D - 357 531 - -
Pvu3g0812 546 MobiDBLite consensus disorder prediction 1 77 - -
Pvu3g0812 546 ProSiteProfiles EF-hand calcium-binding domain profile. 392 427 IPR002048 GO:0005509
Pvu3g0812 546 SMART efh_1 468 496 IPR002048 GO:0005509
Pvu3g0812 546 SMART efh_1 432 460 IPR002048 GO:0005509
Pvu3g0812 546 SMART efh_1 503 531 IPR002048 GO:0005509
Pvu3g0812 546 SMART efh_1 396 424 IPR002048 GO:0005509
Pvu3g0812 546 ProSiteProfiles EF-hand calcium-binding domain profile. 428 463 IPR002048 GO:0005509
Pvu3g0812 546 MobiDBLite consensus disorder prediction 12 42 - -
Pvu3g0812 546 Gene3D Transferase(Phosphotransferase) domain 1 177 356 - -
Pvu3g0812 546 ProSitePatterns EF-hand calcium-binding domain. 477 489 IPR018247 -
Pvu3g0812 546 ProSitePatterns Protein kinases ATP-binding region signature. 97 124 IPR017441 GO:0005524
Pvu3g0812 546 Pfam Protein kinase domain 91 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0812 546 CDD STKc_CAMK 91 348 - -
Pvu3g0812 546 Gene3D Phosphorylase Kinase; domain 1 93 176 - -
Pvu3g0812 546 SMART serkin_6 91 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0812 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Pvu3g0812 546 ProSiteProfiles EF-hand calcium-binding domain profile. 500 534 IPR002048 GO:0005509
Pvu3g0812 546 ProSitePatterns EF-hand calcium-binding domain. 441 453 IPR018247 -
Pvu3g0812 546 ProSitePatterns EF-hand calcium-binding domain. 512 524 IPR018247 -
Pvu3g0812 546 PANTHER SERINE/THREONINE-PROTEIN KINASE 51 534 - -
Pvu3g0812 546 Pfam EF-hand domain pair 397 457 IPR002048 GO:0005509
Pvu3g0812 546 Pfam EF-hand domain pair 467 529 IPR002048 GO:0005509
Pvu3g0812 546 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 51 534 - -
Pvu3g0812 546 SUPERFAMILY Protein kinase-like (PK-like) 89 357 IPR011009 -
Pvu3g0812 546 SUPERFAMILY EF-hand 388 528 IPR011992 -
Pvu3g0812 546 ProSiteProfiles EF-hand calcium-binding domain profile. 464 499 IPR002048 GO:0005509
Pvu3g0812 546 ProSitePatterns EF-hand calcium-binding domain. 405 417 IPR018247 -
Pvu3g0812 546 ProSiteProfiles Protein kinase domain profile. 91 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0812 Pvu-Chr3 12300930 12305553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0812 1 531 EF-hand Containing Proteins AT4G04720 76.735 0.0 841
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu3g0812 Pkinase 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0812 K13412 - gmx:100816859 923.309