Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0804 ATGGATTCCGATGAGCCTCCCTCTCCTTGTCTCCGTTCTTCCTCTCTTCTCAAGGACATCTCCAACTTCACCACTCCCAGACGCCCACCTTTCTCTCTCACCACCGCCCCTTCTCCCGCCACTCAATTCTTCACCGCCTCCAAACATGCACCTACCTCCTCCTCCTTCCACCGCCGCCCCAACAAACCATCTACCGCCGCCACAGCCAAGAAATTCAAGGCCTTCCAATTGGAGCAGTCTCAGTCCTCCCGTAAGGCCCAAATCAACAAGGAGCGCTCCCTCAAATCCCTCGCCAAGTCTCTCTCAGTCTGGCTCAACTTTCTCCTCCAAAATCCTAATTCCTGTGGCTGCCACTTCTCTGCCGCGGATGCTTCCGCTCCCGCTACCAACGGCAAGCGAGACGGCGCCCCGGTAACATCCGTCGTCGGCATCGATTCCACCTGGCGCACTCCCAAGCGCCAGAGGAAGACGTGGTCCGCCAAGGAAAATGCTGCTACGGCGGCTGAGGTTCCTGATTCCTCGTTTTCGCACCTCAGCGATTCTCTCAAGGATGTTTGCAGTTTCGGCGATTTGAAGCAGCGAATGAGCTTGTATTTCAGCATCGCAGCTTGTAAAGAGATCTTCCTACAAATGAATCGCGTCGCCAAGGCAATTGACGAAGGAAGACTGAATATGAAGGCGCATTGCCCTATAGTAACTGATGTCGGGTTGAAGGATAAGGCCACGAGAATTCTCATGTGTTATAATTCAACTTGGTTGCGAATTGGATTGTATGTGATTTTTGGCGGTGACTCCTTGGTGTTAAATAGTGATGTGGATTCTGATCATGATGCTGTGTTCTTGAGAATGGTCGTTGACAAATTATTTTTTTCGCATGAGGGCTTAGCTAAAGCGTATGCTTATAACAAAATGGTTGAAGGCGTGTATAGGTCAGGTTACTATGAGAATATGGGGAATGTGATATTGAAAAGAATTTTGTTGCTTGTGCTTGTTCTGGATAAAGCTAAATGTCAGAGTTACCTTCCACTGGAGTATGGTATTGATGGATTGGATGGGGGTTCTCCTTTGTTATTCAAACCAGAATCCTGGATTAAATCAAGCAGTCAGCTGATTCATGAATTTCTATCGTCTGATGTAATGCATGGAGAAGGCAATCTTCTAACACATTTGGTGATTTTAGGTTACAAATTATCTCATCAACAGGAACCTCTCGTCGAGTATGATTTCAGGATCGGAGACTTATTTGTAGATCTCCAAGATGGATTAAAACTGTGTAGAGCTATTCAGCTCTTGCTGCATAATTCTTCGATCCTCATGAAAATTGTAGTTCCCTCTGATACTCCTAAGAAAAAATTAGCAAACTGCAGTCTTGCGCTGCAATATGTTAGGCAAGCTGGTGGGTCACTACTTGATGAAGATGGCATCATGATTGTGGCAGATGATATTGCTAATGGAGACAAAGAACTTACAGTTTCCTTGCTCTGGAACATGTTTGTTCATTTGCAGCTTCCTCTTTTGGTTGATAAAACAAGTTTAGAAGGGGAAATTTCTAAAATTCAAGGAGGCAAGGTTCTCGTAAACAATGCAAGTTCTAGCTCTATGGAATTGCTTTTGAATTGGATTCAGGCAGTTTGTGGCAATTATGATTGTGCAATTGACAATTTCCATTCTCTTGTTGATGGCAAAGCTGTCTGGTGCTTACTTGATTATTACTTCCAGAAAGAACTTCAAAATTCCTGTTCTTTGAAGGAAGTTAGTTTGAAAAGTGGCAAGGCATCAATTATGTCGGTTGATGAATATTCAGATGCACTGTATAATTTTATACTATCCCAAAAGTTGACTACATTATTGGGGAACTTCCCAGAGGTACTTCAAATTAGTGACCTACTTCAATATAATGGTGCTTGCAGTGACCGAAGTGTGGTGATTTTGTTGGTTTTCCTGGCAAGCCAATTATTTGTCAAGAAAAATTTGGATCACATAAATTTCCATAAACTCTTGGGTTATGACTGCCATAGTCCGAACCATAGACATTTGAGGATGCTAAGGTGCCTTTCAAATCCTGAATCAATACAAAAGCCTGATGCTTCTGATGTGCTTGGCAATGAAGATGCTGCAAGAAAATTCAAGGCGATCCAAACTTGGTGGCAAGAAATGGCTGAAAGAAACGGTCTCAACAAACCAGCTGTCTCTAATTTGATGGGATCCAAAATCACTGAATGCAGCACCAACATTAGAAGAGAAAATGCTACAAGAACAATACAACTGCATCTCAGAGGATTGGTTGCACGGTGCCGGTTTCTGAAGATGGTAAAAGCTATTACCCTTTTGCAAACTGTTTTCAGAGCTTGGCTAAAAGTGAGGCAAAAGTCAGCCTGTGTGATATTATCTACTGTTCAAGTCTGTGACTCTTCATGTGAAATGTTGAAGCTATCAGAAACATATAAGAGATATGCCATGCTTTTCATTTGTAGACGTTCCTTTTTGAGGTTAAAGAGCTCAGCACAGATTATCCAGAAAGCAGTTAGGAGTTGGCTCTATAGGAGGCATAAGCAAGTGTCTTGTACAAGTCCTGATCTTTTGATTTCAGATATGGTAGTGGCTGCTATTAGTGTTCAGAAATTGGTCCCTGGTAGGATGGCACGATCTAGATATATTCATCAGCTAGATCAGAGAGAGAAAGATTTATCTTTTTCCCAACTGAAAGTCACTTTCCATCTTCAAACAAATGCAGCCATTATCATTCAGCTTGCTTGGAAAAAGTTCATGTGCTGCAAGTCTACTCAGAAGCAACACCTGTTTGCAACTAAAATTCAACGAAATTTCCGTAGGTGGTTATTGAGAAAAAGTTATCTAGATCAGATTCAGGCTATCGTACAGATTCAATCTTATTTTCGAATGTGGAGATGTGTAAATGCTTTCCAGCTCTTCAAGATAGAATTTAAGGCAGCTGTTGTTATTCAATCTTACTTACGGGGTTGGTTTGTCCGAAAGATTGCTGGTGCACGTAGGAATCACCTATTTGCAACTAAAATTCAACTAAATTTCCGAAGGTGGTTGTCAAGAAAAAGTTTTTTAAATAAGATTCAAGCTGTAATAAAAATTCAATCTTATTTTCGGATGTGGCGATGTGTAAATGATTTCCAGCACTTCAAAATTGAGTTTAAAGCAGCTGTTGTCATTCAGTCTTGTTTAAGGGGCTGGTTTGCCCGAAAGGATGCTTGTACGCGTCGGACGGACATTGTTGAGATTCAAAGGCATTGCCGTGGTTGGCTTGTAAAGCGGGACTTCTTGTTCCTAAGAGACGCTGTAGTAAAGATCCAGTGTGTCATTCGAAGCTTGAAGTGCCAAAAGGCTCTCAATTGCCAGAAAGATGCTGCTTTGGAGATCCAGCGCTTTATAAGGGGGCATGTAACTCGGAATCAGCTATTAGGCAGTGCTTCCAAGCTGGGCACAATTATTCCTATTAGTTGCAGCACAGCACCATTTGGGTTTTGTAGTTTTCAATTGGAACTGTTCTTGTTTTCGGTTGTGAAATTGCAACGATGGTGGAAGGGTCTCTTGTTGCTGAAGTTAATGAATAAATCGGCCATCATTATTCAGTCATGTACCCGTGGGTGGATAGCCAGGCGAAATGCTACTGTTTATAGACGCCATGTTGTCATCCAGGAAGATGCTGCGTTGGTGATTCAAACCTACATTAGGGAACATTTAACCCGACATCGAATATTAGGTGGTGCTTCTAACCTAAGTGCAGTCATTCCAGTTGGCTGTCGTAGTCTTCCACTAGGTCGATTTTTGCTTTCAGTTGTGAAATTGCAACGATGGTGGAAGGGTCTCTTGTTACAGAAATTGATGACAAAGTCTGCCATTGTTATTCAATCTTGTACTCGTGGGTGGATAGCCAGACGAAAGGCTAGTGTTCAGAGATATCGTATTATTGTCATCCAATCCCACTGGAAAGGTTACCGTGCCCGTAAAGTTTCGAAAGAACAGTTACTGGATTTGCGTTTGAGAATGCAAAAGTCTGCCAGAAATGTGGATGACAGCAAGCGTCTCATAAACAGACTCTTGGCAGCACTTTCAGAGCTACTCAATATGAAGAGTCTTAGTAACATCCTTCATACTTGTTCAATATTGGACATGGCTACAGGGCATTCTCAGAAATGTTGTGAAGAACTTGTGGCTGCAGGGGCTATTGATACTTTGCTGCGACTGATTCAAACAGTCAGCCGGAGTATACCTGATCAGGAGGTTCTAAAGCATGCTTTATCAACTCTCCGAAATCTTGCCCGCTATCCTCATCTTCTACATGTGTTGATCCAAAGTCGTAATTCTGTACAGATAATTGTCTTGGAGTTATTGAGGAATAAAAACGAGGGCTTCTTCATTGCTTCTGAACTTTTGAAGAAGATATGTTCAACTGGCATAGGTGTTGAGGTGATTTTTAAGTCCCCTGCTCTGCTAAAACGATTGCACGGCCTTGTTGAGGACCATAAACGGAAGGGAGTTTTCGAGAAAAGAAATCCTAGGGCTCCTAACCTGGTTATCAAAGAAAACAGAGAGAGAAGATTGAAGGAGGCTGCTGAGATTTTGAAACTGATAACAAGGGCATGA 4617 0.4243 MDSDEPPSPCLRSSSLLKDISNFTTPRRPPFSLTTAPSPATQFFTASKHAPTSSSFHRRPNKPSTAATAKKFKAFQLEQSQSSRKAQINKERSLKSLAKSLSVWLNFLLQNPNSCGCHFSAADASAPATNGKRDGAPVTSVVGIDSTWRTPKRQRKTWSAKENAATAAEVPDSSFSHLSDSLKDVCSFGDLKQRMSLYFSIAACKEIFLQMNRVAKAIDEGRLNMKAHCPIVTDVGLKDKATRILMCYNSTWLRIGLYVIFGGDSLVLNSDVDSDHDAVFLRMVVDKLFFSHEGLAKAYAYNKMVEGVYRSGYYENMGNVILKRILLLVLVLDKAKCQSYLPLEYGIDGLDGGSPLLFKPESWIKSSSQLIHEFLSSDVMHGEGNLLTHLVILGYKLSHQQEPLVEYDFRIGDLFVDLQDGLKLCRAIQLLLHNSSILMKIVVPSDTPKKKLANCSLALQYVRQAGGSLLDEDGIMIVADDIANGDKELTVSLLWNMFVHLQLPLLVDKTSLEGEISKIQGGKVLVNNASSSSMELLLNWIQAVCGNYDCAIDNFHSLVDGKAVWCLLDYYFQKELQNSCSLKEVSLKSGKASIMSVDEYSDALYNFILSQKLTTLLGNFPEVLQISDLLQYNGACSDRSVVILLVFLASQLFVKKNLDHINFHKLLGYDCHSPNHRHLRMLRCLSNPESIQKPDASDVLGNEDAARKFKAIQTWWQEMAERNGLNKPAVSNLMGSKITECSTNIRRENATRTIQLHLRGLVARCRFLKMVKAITLLQTVFRAWLKVRQKSACVILSTVQVCDSSCEMLKLSETYKRYAMLFICRRSFLRLKSSAQIIQKAVRSWLYRRHKQVSCTSPDLLISDMVVAAISVQKLVPGRMARSRYIHQLDQREKDLSFSQLKVTFHLQTNAAIIIQLAWKKFMCCKSTQKQHLFATKIQRNFRRWLLRKSYLDQIQAIVQIQSYFRMWRCVNAFQLFKIEFKAAVVIQSYLRGWFVRKIAGARRNHLFATKIQLNFRRWLSRKSFLNKIQAVIKIQSYFRMWRCVNDFQHFKIEFKAAVVIQSCLRGWFARKDACTRRTDIVEIQRHCRGWLVKRDFLFLRDAVVKIQCVIRSLKCQKALNCQKDAALEIQRFIRGHVTRNQLLGSASKLGTIIPISCSTAPFGFCSFQLELFLFSVVKLQRWWKGLLLLKLMNKSAIIIQSCTRGWIARRNATVYRRHVVIQEDAALVIQTYIREHLTRHRILGGASNLSAVIPVGCRSLPLGRFLLSVVKLQRWWKGLLLQKLMTKSAIVIQSCTRGWIARRKASVQRYRIIVIQSHWKGYRARKVSKEQLLDLRLRMQKSARNVDDSKRLINRLLAALSELLNMKSLSNILHTCSILDMATGHSQKCCEELVAAGAIDTLLRLIQTVSRSIPDQEVLKHALSTLRNLARYPHLLHVLIQSRNSVQIIVLELLRNKNEGFFIASELLKKICSTGIGVEVIFKSPALLKRLHGLVEDHKRKGVFEKRNPRAPNLVIKENRERRLKEAAEILKLITRA* 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0804 1538 ProSiteProfiles IQ motif profile. 1309 1337 IPR000048 GO:0005515
Pvu3g0804 1538 Pfam Calponin homology (CH) domain 410 500 IPR001715 GO:0005515
Pvu3g0804 1538 SMART iq_5 1099 1121 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 1053 1075 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 746 768 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 979 1001 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 1027 1049 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 1285 1307 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 1004 1026 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 930 952 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 769 792 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 1308 1330 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 1192 1214 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 830 852 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 1076 1098 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 1122 1144 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 953 975 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 864 886 IPR000048 GO:0005515
Pvu3g0804 1538 SMART iq_5 1222 1244 IPR000048 GO:0005515
Pvu3g0804 1538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1011 1074 IPR027417 -
Pvu3g0804 1538 Pfam IQ calmodulin-binding motif 833 850 IPR000048 GO:0005515
Pvu3g0804 1538 Pfam IQ calmodulin-binding motif 935 951 IPR000048 GO:0005515
Pvu3g0804 1538 Pfam IQ calmodulin-binding motif 1030 1045 IPR000048 GO:0005515
Pvu3g0804 1538 Pfam IQ calmodulin-binding motif 1009 1025 IPR000048 GO:0005515
Pvu3g0804 1538 Pfam IQ calmodulin-binding motif 1195 1212 IPR000048 GO:0005515
Pvu3g0804 1538 Pfam IQ calmodulin-binding motif 1056 1073 IPR000048 GO:0005515
Pvu3g0804 1538 Pfam IQ calmodulin-binding motif 982 998 IPR000048 GO:0005515
Pvu3g0804 1538 Pfam IQ calmodulin-binding motif 1287 1305 IPR000048 GO:0005515
Pvu3g0804 1538 Pfam IQ calmodulin-binding motif 1082 1097 IPR000048 GO:0005515
Pvu3g0804 1538 Pfam IQ calmodulin-binding motif 1313 1327 IPR000048 GO:0005515
Pvu3g0804 1538 Pfam IQ calmodulin-binding motif 1125 1143 IPR000048 GO:0005515
Pvu3g0804 1538 SMART arm_5 1387 1432 IPR000225 GO:0005515
Pvu3g0804 1538 ProSiteProfiles IQ motif profile. 865 894 IPR000048 GO:0005515
Pvu3g0804 1538 ProSiteProfiles IQ motif profile. 980 1009 IPR000048 GO:0005515
Pvu3g0804 1538 PANTHER UNCHARACTERIZED 1003 1242 - -
Pvu3g0804 1538 PANTHER UNCHARACTERIZED 1225 1536 - -
Pvu3g0804 1538 PANTHER UNCHARACTERIZED 7 998 - -
Pvu3g0804 1538 Gene3D - 907 951 - -
Pvu3g0804 1538 Gene3D - 396 502 IPR036872 -
Pvu3g0804 1538 ProSiteProfiles IQ motif profile. 1077 1106 IPR000048 GO:0005515
Pvu3g0804 1538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1057 1140 IPR027417 -
Pvu3g0804 1538 MobiDBLite consensus disorder prediction 1 66 - -
Pvu3g0804 1538 ProSiteProfiles IQ motif profile. 1193 1220 IPR000048 GO:0005515
Pvu3g0804 1538 Gene3D - 529 653 IPR036872 -
Pvu3g0804 1538 ProSiteProfiles IQ motif profile. 1223 1252 IPR000048 GO:0005515
Pvu3g0804 1538 ProSiteProfiles IQ motif profile. 1286 1313 IPR000048 GO:0005515
Pvu3g0804 1538 ProSiteProfiles IQ motif profile. 747 775 IPR000048 GO:0005515
Pvu3g0804 1538 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 1225 1536 - -
Pvu3g0804 1538 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 1003 1242 - -
Pvu3g0804 1538 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 7 998 - -
Pvu3g0804 1538 ProSiteProfiles IQ motif profile. 1054 1083 IPR000048 GO:0005515
Pvu3g0804 1538 ProSiteProfiles Calponin homology (CH) domain profile. 380 502 IPR001715 GO:0005515
Pvu3g0804 1538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1266 1331 IPR027417 -
Pvu3g0804 1538 SUPERFAMILY Calponin-homology domain, CH-domain 327 579 IPR036872 -
Pvu3g0804 1538 SUPERFAMILY ARM repeat 1355 1502 IPR016024 -
Pvu3g0804 1538 ProSiteProfiles IQ motif profile. 1123 1152 IPR000048 GO:0005515
Pvu3g0804 1538 MobiDBLite consensus disorder prediction 8 62 - -
Pvu3g0804 1538 Pfam Armadillo/beta-catenin-like repeat 1387 1432 IPR000225 GO:0005515
Pvu3g0804 1538 ProSiteProfiles IQ motif profile. 931 960 IPR000048 GO:0005515
Pvu3g0804 1538 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1398 1431 IPR000225 GO:0005515
Pvu3g0804 1538 Gene3D - 1341 1506 IPR011989 -
Pvu3g0804 1538 Gene3D - 956 1005 - -
Pvu3g0804 1538 Gene3D - 1102 1147 - -
Pvu3g0804 1538 Gene3D - 1055 1101 - -
Pvu3g0804 1538 Gene3D - 746 793 - -
Pvu3g0804 1538 Gene3D - 1192 1249 - -
Pvu3g0804 1538 Gene3D - 1006 1054 - -
Pvu3g0804 1538 Gene3D - 1284 1334 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0804 935 1129 Myosins gene family AT5G43900 27.411 5.04e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0804 K16743 - gmx:100817636 2538.07