Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0794 ATGATGGCAATGGTGAAGTACTCAGCATACCTTCTCACCAACCCTGCTTCTCCAAGGTCTCAACTCTGCACCTTACCTTCTATCCACAATCTTCAACACACCAACCAACCCTCTATGTCTTCCCTCAAACCTCTTCACATTTCATCCGCTCACAACTTTGCTTTGCCACCAGAACTCAGAAGGAGGGTCACAGCGTGCCAGGCCTATGAAGCAGACAGGTCACGCCCACTGGAGCTTAACATTGAGCTTTCTGACGAAGAAGCAGGGACAGAAACAACCCAGAGACTCAAAATTGGTTTGTATTTTGCCACCTGGTGGGCTTTGAATGTTGTCTTCAACATATACAACAAGAAGGTTCTGAATGCCTTTCCTTACCCCTGGCTTATTTCCACTTTGTCCCTTGCTGCTGGCTCTCTCATGATGTTAATCTCATGGGCCACAAGGGTTGCTGATGTTCCAAAACTTAATCTGGAGTTCTGGAAGGCCCTCTTTCCTGTTGCTGTGGCACACACAATTGGTCATGTTGCAGCTACTGTGAGTATGTCCAAAGTTGCAGTTTCATTCACCCACATCATCAAGAGTGGAGAGCCTGCTTTCAGTGTCCTGGTATCTAGGTTCTTGCTTGGGGAAGCATTCCCTGTGCCGGTTTACCTGTCACTGCTGCCAATTATAGGAGGTTGCGCACTTGCTGCTGTGACGGAGCTGAATTTCAATATGATTGGATTTATGGGTGCTATGATATCCAATTTGGCCTTTGTCTTTCGGAATATATTCTCAAAGAAGGGAATGAAAGGGATGTCTGTTAGTGGAATGAATTACTATGCTTGTCTTTCCATATTATCACTATTGATTCTCACACCTTTTGCCATTGCTGTGGAGGGCCCAAAGCTGTGGGCTGCAGGCTGGCAAACAGCCTTGTCTCAGATTGGTCCCAATTTTGTCTGGTGGGTAGCTGCTCAGAGTGTCTTTTACCACTTGTACAATCAAGTATCTTACATGTCCCTTGATCAGATTTCTCCCTTAACATTTAGCATAGGGAACACAATGAAGAGAATTTCGGTTATTGTGTCTTCAATCCTTATCTTCCACACACCAATTCAGCCTGTCAATGCTCTTGGTGCAGCCATTGCAATTCTTGGTACCTTCCTCTATTCACAGGCTAAACAGTGA 1170 0.4547 MMAMVKYSAYLLTNPASPRSQLCTLPSIHNLQHTNQPSMSSLKPLHISSAHNFALPPELRRRVTACQAYEADRSRPLELNIELSDEEAGTETTQRLKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLISTLSLAAGSLMMLISWATRVADVPKLNLEFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPVPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSILSLLILTPFAIAVEGPKLWAAGWQTALSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPIQPVNALGAAIAILGTFLYSQAKQ* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0794 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 138 232 - -
Pvu3g0794 389 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 96 388 IPR004696 GO:0016021|GO:0022857|GO:0055085
Pvu3g0794 389 PANTHER SOLUTE CARRIER FAMILY 35 36 389 - -
Pvu3g0794 389 Pfam Triose-phosphate Transporter family 96 385 IPR004853 -
Pvu3g0794 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 288 386 - -
Pvu3g0794 389 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 36 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0794 Pvu-Chr3 11923843 11926752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0794 20 389 Antiporters AT1G61800 80.000 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0794 K15283 K05350 gmx:100820126 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0794 3 11923843 11926752 Pvu3g0794 3 11923843 11926752 ECH
Pvu3g0794 3 11923843 11926752 Pvu6g1576 6 26470971 26473964 PCT