Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0792 TCTGAGAAGTCCAAAAAGTCTGGAAAGGCTCCATCAGCATCCCTTCTGATTGACTTTTTGAAGACATCATACCAAGGTGATTTAGATGTCCTCCTCCTTGAAGACAAAATGAATTTCAATTCACGAGCAGCTTCACTGTTGGAGGTTAGAAAAGGAGGTGGCTATCTTCTTGTAGCAACAGATATAGCTGCTAGGGGGTTTGACCTTCCAGAAATGTCTCACATTTACAACTTTGATCTGCCAAGGACTGCTATTGATTATCTTCATCGAGCAGGCCGAACATGTAGAAAACCCTTTTCTGACATCAATTGTACTGTTACCAGCATTATTGTTCCAGATGAGCGATTTGTTCTCCAGAGGTATGAAAATGAGTTGATGTTCGACTGTGAAGAGCTTATTATTTCATAA 408 0.4044 SEKSKKSGKAPSASLLIDFLKTSYQGDLDVLLLEDKMNFNSRAASLLEVRKGGGYLLVATDIAARGFDLPEMSHIYNFDLPRTAIDYLHRAGRTCRKPFSDINCTVTSIIVPDERFVLQRYENELMFDCEELIIS* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0792 135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 128 IPR027417 -
Pvu3g0792 135 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 135 IPR001650 -
Pvu3g0792 135 Gene3D - 9 133 IPR027417 -
Pvu3g0792 135 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 58, CHLOROPLASTIC 1 133 - -
Pvu3g0792 135 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 133 - -
Pvu3g0792 135 Pfam Helicase conserved C-terminal domain 24 96 IPR001650 -
Pvu3g0792 135 SMART helicmild6 14 98 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0792 Pvu-Chr3 11900712 11901885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0792 37 123 Eukaryotic Initiation Factors Gene Family AT1G72730 37.079 1.47e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0792 - - pvu:PHAVU_003G0764000 261.536