Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0791 ATGGACACCGCCACGCTCTCACTGTTGTCGCCTCTTCCCACTCAGCGTTTTCTTTCATATGAAAAACCAACTCCTACTTGTTACGTCCTTCCTTCTCACAACCATTTTCTCAAACACTTCTCCTACACTACTAACCTTAATCGCAACTCCAAATTCAGAACTCCAGAAGCCGTTCTCGATACCTCTCCCATAACCCCAACAGCGCTCACCACTCCCACTCTCAGAGAATTATGCCAAGCTCACGTTCCTGAACATATATTGCAAAGGATGGAAGATATTGGATATGTAATGCCCACAGATATCCAGAGGGAAGCTTTGCCTTACCTTTTTTCCGGGCGTGACTGCATTCTTCATGCTCAGACAGGTTCTGGGAAGACACTCACATACCTGCTTTTGATTAACTCCATCATCAATGCTGCAAAATCCTCTGTGCAAGCCCTAGTCGTTGTGCCCACCCGGGAACTCGGAATGCAAGTCACTAAGGTAGCTAGGACATTGGCTGCAAAGCCAACTGGAGTCGTTGGGGAGCACAAGTCATGTTCCATCATGGCTCTGCTAGATGGAGGAACACTAAAAAGACACAAGACTTGGTTAAAGGCAGAGCCACCAACAGTAGTGGTTGCAACAGTTGGGAGTTTATGCCAAATGCTTGAAAGACATACTTTTTCGCTTGAAACTGTGCGTGTGCTGATTGTTGATGAGGTTGACTGTATTTTCAATTCTTCAAAGCAAGTGAGTTCTCTTCGAAAAATTTTGACTTCATATTCATCTTGCAATAACCGTCAGACAGTCTTTGCCAGTGCATCTATACCACAACATAACCGATTTATTCATGACTGTCTGCAGCAAAAATGGACAAAGAGAGATGTGGTCCATATTCATGTCAGTGCTGTGGAGCCCATGCCATCTCGCCTATATCATAGATTTATAAGATGTGAAACCGAAAGAAAATTAGAAACCCTGTTATCCTTGGTACAATCTGATGCGCCTGAATCTGGCATTATATTTGTTGCTGAGCAG 1020 0.4422 MDTATLSLLSPLPTQRFLSYEKPTPTCYVLPSHNHFLKHFSYTTNLNRNSKFRTPEAVLDTSPITPTALTTPTLRELCQAHVPEHILQRMEDIGYVMPTDIQREALPYLFSGRDCILHAQTGSGKTLTYLLLINSIINAAKSSVQALVVVPTRELGMQVTKVARTLAAKPTGVVGEHKSCSIMALLDGGTLKRHKTWLKAEPPTVVVATVGSLCQMLERHTFSLETVRVLIVDEVDCIFNSSKQVSSLRKILTSYSSCNNRQTVFASASIPQHNRFIHDCLQQKWTKRDVVHIHVSAVEPMPSRLYHRFIRCETERKLETLLSLVQSDAPESGIIFVAEQ 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0791 340 CDD DEADc 86 294 - -
Pvu3g0791 340 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 47 340 - -
Pvu3g0791 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 274 IPR027417 -
Pvu3g0791 340 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 106 288 IPR014001 -
Pvu3g0791 340 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 58, CHLOROPLASTIC 47 340 - -
Pvu3g0791 340 SMART ultradead3 94 309 IPR014001 -
Pvu3g0791 340 Gene3D - 37 290 IPR027417 -
Pvu3g0791 340 Pfam DEAD/DEAH box helicase 99 272 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0791 Pvu-Chr3 11894574 11898062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0791 82 236 Eukaryotic Initiation Factors Gene Family AT3G19760 30.968 2.59e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0791 - - pvu:PHAVU_003G0764001 660.603