Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0760 ATGTCTTCTTCCAATAAACACTGGCCAAGCATGTTCAAATCCAAGCCTTGCAATTCCCACAACCAATGGCAGCATGAAGACAACTCTTCTGTCCTGTCCACCGGATGCCAAAGAAGCCCTTATACTCCAGGAAGTGAAGAGAGAACTCCAGAACCGAAGTCAAGATGGAACCCAAAACCCGAGCAAATTCGCATTCTAGAAGCCATCTTCAACTCTGGGATGGTGAATCCCCCAAGGGATGAGATAAGGAAGATCCGGGTGCAGTTGCAGGAGTATGGCCAAGTTGGTGATGCCAACGTGTTCTACTGGTTCCAGAATCGCAAATCCAGGAGCAAGCACAAGCTCCGCCACATCCAAAACTCAAAGAACCAGAACACAGAAACACAACCAAACTCAGTTTCTCTCTCTCAAATCACACCACCTTCAACCTCATCCTCTTCCTCTGACAAATCCTCTTCAAAAGAACTAGTGCACCCAAATGGGTTTTCCTTTGGCTTCTCAAATGTCAATGATGCAGTGCCTAATTCTCCCACTGCTTCTGTGAATCAGACTTATTTTCATTCTCACAATAACACCGATTTGCTACCACCAGCAATTGAGTCTTTATACTTTCCTTTGAACAATAATGGTCAAGGTGTAATAGTTAATAATACCATCACAACGCATGGGTTTTCTGTCCCTCAGTTCTCCAACAATATCATGCAATCTCAACCACAGTGTCAACCAAATGTTGGACCTAGCAGTACTCTTTTTCTCAACGAGATCATGAACCATGGAACCTTCTCAAAGAGAGACCAAGATCAGGAAAAGGCATTAAAATTAATGCACCGTCAACAACTTAGCTTCCCTCTCACTTCACCTTCAACCACAACCCTCGTTCCCTCCATCTCAGCTCCTCCATGTCCAATCACCCAACTTCAAGGTGTTGGTGGTGAGGTTACAGCAGATAGAGGAAAATGTATAGTTTTCATTAACGATGTTGCATTTGAGGTTATGAAAGGACCCTTCAACGTGCGCCAAGCCTTTGGAGATGAAGCTGTGCTTATCCACTCTTCCGGCCCTGTCCCCACCGACGACTGGGGCACTACCCTCCACCCACTGCAGCATGGTGCTTACTATTATCTGGTCTGCACTTTTCTTAAACACTGCAATTTTTTTTAA 1161 0.4496 MSSSNKHWPSMFKSKPCNSHNQWQHEDNSSVLSTGCQRSPYTPGSEERTPEPKSRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRVQLQEYGQVGDANVFYWFQNRKSRSKHKLRHIQNSKNQNTETQPNSVSLSQITPPSTSSSSSDKSSSKELVHPNGFSFGFSNVNDAVPNSPTASVNQTYFHSHNNTDLLPPAIESLYFPLNNNGQGVIVNNTITTHGFSVPQFSNNIMQSQPQCQPNVGPSSTLFLNEIMNHGTFSKRDQDQEKALKLMHRQQLSFPLTSPSTTTLVPSISAPPCPITQLQGVGGEVTADRGKCIVFINDVAFEVMKGPFNVRQAFGDEAVLIHSSGPVPTDDWGTTLHPLQHGAYYYLVCTFLKHCNFF* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0760 386 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 379 - -
Pvu3g0760 386 Gene3D - 53 119 - -
Pvu3g0760 386 MobiDBLite consensus disorder prediction 121 155 - -
Pvu3g0760 386 SMART HOX_1 51 118 IPR001356 GO:0003677
Pvu3g0760 386 SUPERFAMILY Homeodomain-like 46 117 IPR009057 -
Pvu3g0760 386 CDD homeodomain 52 114 IPR001356 GO:0003677
Pvu3g0760 386 MobiDBLite consensus disorder prediction 1 44 - -
Pvu3g0760 386 MobiDBLite consensus disorder prediction 113 155 - -
Pvu3g0760 386 MobiDBLite consensus disorder prediction 1 60 - -
Pvu3g0760 386 ProSiteProfiles 'Homeobox' domain profile. 49 114 IPR001356 GO:0003677
Pvu3g0760 386 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 379 IPR044557 GO:0003700|GO:0050793
Pvu3g0760 386 Pfam Homeodomain 53 113 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0760 Pvu-Chr3 11246375 11248247 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0760 1 377 Wox Gene Family AT2G33880 41.882 2.44e-78 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pvu3g0760 Homeodomain 2.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0760 - - gmx:100777643 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0760 3 11246375 11248247 Pvu3g0760 3 11246375 11248247 ECH