Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0754 ATGTGTGCGGCGGAGAAGGACGGGATCATGCTCTTCGGCGTGCGCCTCACCGTATCCGATAACAACCCCACCTCTCTCAGAAAGAGTGCCAGCATGAACAATCTTCCTCCTTACTCTGAATCGCCTCCGCCGCACCATCGCAATGCGGGCTACGCCTCCGACGACGTCATTCATCTCTGCCGTCGCACGCGGAAGCCAGGGGTTCCGTGGACGGAGGAGGAGCACAGGCAGTTCCTGTTGGGATTAGAGAACGTTGGGAAAGGAGATTGGAGAGGAATTTCTAGAAACTTCGTCAAGACTCGAACGCCCACTCAGGTCGCGAGTCACGCTCAAAAGTATTTCCTCCGTCGTCACACTCACAATCTCCAACGCCGAAGATCTAGTCTCTTCGACATCACCACCGACTCGGTGAAGGAAGATGAACAAACGGTGCCGTCAGCTAGGTTGAAACCGGTTTTGCCGGCACCTCCGTCTTTGAAAATGGATGAGTTGGAGTTGAATGGGAGGTCGGTGTGGCTGAAGCTGAGGCTGCCGGAGCCGGAGGAGCCTTCGCCGGCGACTTCTGAGGTTGTGTCTAATGGGAATTTGAGCGGTGACGGGGACATGATTACTGTTGCTTGA 621 0.5539 MCAAEKDGIMLFGVRLTVSDNNPTSLRKSASMNNLPPYSESPPPHHRNAGYASDDVIHLCRRTRKPGVPWTEEEHRQFLLGLENVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHTHNLQRRRSSLFDITTDSVKEDEQTVPSARLKPVLPAPPSLKMDELELNGRSVWLKLRLPEPEEPSPATSEVVSNGNLSGDGDMITVA* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0754 206 MobiDBLite consensus disorder prediction 24 50 - -
Pvu3g0754 206 PANTHER TRANSCRIPTION FACTOR KUA1 5 149 - -
Pvu3g0754 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 118 IPR017930 -
Pvu3g0754 206 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 65 116 IPR006447 GO:0003677
Pvu3g0754 206 PANTHER OS01G0187900 PROTEIN 5 149 - -
Pvu3g0754 206 Gene3D - 68 119 - -
Pvu3g0754 206 SMART sant 66 116 IPR001005 -
Pvu3g0754 206 MobiDBLite consensus disorder prediction 178 206 - -
Pvu3g0754 206 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Pvu3g0754 206 SUPERFAMILY Homeodomain-like 63 117 IPR009057 -
Pvu3g0754 206 CDD SANT 69 114 IPR001005 -
Pvu3g0754 206 ProSiteProfiles SANT domain profile. 70 118 IPR017884 -
Pvu3g0754 206 ProSiteProfiles Myb-like domain profile. 62 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0754 Pvu-Chr3 11066747 11067936 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu3g0754 Myb_DNA-binding 2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0754 - - gmx:778091 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0813 2 11747158 11749259 Pvu3g0754 3 11066747 11067936 PCT