Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0746 ATGGACGTGACAAACATTGTCCATGCAAGGGAGCTCACCATAAATTATACTCTTTTGCAGGTTAAACAGGATGGTTTCTTTCCTGCAGATCTGCTTTTCTTGGCAAGCACTAATTCAGATGGTGTCTGCTACATTGAGACTGCTAACTTGGATGGGGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTATGTTACTCCAGATAAGGCATCCGAGTTTAAAGGTGAAATTCAATGTGAACAACCAAACAATTCATTGTATACCTTTACTGGAAATCTAATAAGCCAAAAGCAAACATTGCCTCTCAGTCCAAATCAAATTTTGTTGCGGGGTTGCAGTCTGAGGAATACAGAGTATATTGTTGGGGTTGTTGTATTTACAGGACATGAAACAAAGGTGATGATGAATACAATGAATGTTCCTTCCAAAAGAAGTACATTAGAGAGAAAGCTTGACAAACTCATACTAACTTTATTTGCAACTCTCTTCATGATGTGTTTCATTGGAGCCATAGGCAGTGCTATCTTCGTAAATAAAAAATATTTTTACTTGCATCTTGATTCATCAGAAGAGGGCTCGGCACAGTTCAACCCCAGAAATAGATTTTTGGTTTTTATCCTGACTATGTTTACCCTAATCACACTATACTCAACAATCATTCCCATTTCACTTTATGTGTCCATAGAGATGATAAAATTTATTCAATCAACTCAATTTATCAACAAGGACTTGTCCATGTACCATGCTGAAACAAATACACCGGCATTAGCCAGAACATCAAATTTGAATGAAGAACTTGGTCAGGTGGAATACGTTTTCTCTGATAAAACTGGAACTCTAACAAGAAATTTAATGGAGTTCTTCAAGTGTTCAATTGGAGGAGAGGTCTATGGAAATGGTGTGACTGAAATTGAGAGAGGATTAGCAGAGCGCAGTGGCATGAAGATTGAGGAAAATACTTCTTCCAAAGCAGTGCACGAGAGAGGTTTTAATTTTGATGATGCTAGGCTTATGAGAGGAGCTTGGAGGAATGAGCCTAATCCAGATGTTTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTACTGCCAGAGGGTGATGAGTCCCCTGAAAAGATCAGATATCAAGCTGCATCACCTGATGAGGCTGCTTTGGTTATTGCTGCAAAACACTTTGGTTTCTTTTTCTACAGACGCACACCTACAATGATATATGTTCGTGAATCTCATGTTGAGAAAATGGGCAAAATTCAAGACATGTGTTATGAGATTTTAAATGTGCTTGAGTTTAATAGTACAAGGAAGCGTCAGTCTGTTGTATGCCGTTATCCTGATGGAAGGCTTGTACTATACTGTAAGGGTGCTGATACTGTAATCTATGAGAGAATGGCTGATAGTAGTAATAATATCAAGAAAGTCACCAGGGAGCATTTGGAACAATTTGGATCTGCTGGACTACGCACATTATGCCTAGCCTACAAAGAATTGCATCCTGATGTTTATGAAAGCTGGAATGAGAAGTTTATCCAGGCCAAGTCATCTCTAAATGATCGTGAAAAGAAATTGGATGAGGTGGCAGAACTCATTGAAAATGATCTCATTTTAATTGGTAGCACAGCCATAGAAGACAAACTTCAAGAGGGTGTACCTGCTTGCATAGAGACTCTTCAAAGAGCTGGTATTAAAATTTGGGTTCTTACTGGGGACAAGATTGAAACAGCTATAAACATAGCCTATGCATGCAACTTGATAAACAATGAAATGAAGCAATATGTGATTAGTTCAGAAACTGATGCAATTAGAGAAGTTGAAGACAGGGGTGACCAAGTGGAAATTGCACGGTTTATCAAAGAAGAAGTGAAAAAAGAGCTGAAGAGATGCCTTCAGGAAGCACAAAACTATTTTCACTCCTCATCTGGGCCAAAATTAGCACTTGTAATTGATGGAAAATGTCTAATGTATGCATTGGATCCAAGTTTAAGAGTGATGCTGCTGAACATAAGTTTGAATTGTCATTCTGTTGTTTGCTGTCGAGTTTCTCCTTTACAGAAAGCACAGGTCACGAGTATGGTTAAGAAAGGTGCACAAAAAATAACACTTAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGGTTGGAGGGTATGCAAGCAGTGATGGCCAGCGATTTTGCCATTGCACAGTTTCGATACCTTGCAGACTTGCTTCTTGTTCATGGCAGATGGTCGTATTTGCGAATTTGCAAGGTTGTCATATACTTCTTTTACAAGAATCTCACCTTCACTCTTACTCAGTTCTGGTTCACGTTTCAAACTGGGTTTTCTGGTCAGAGATTCTATGATGATTGGTTTCAGTCATTATATAATGTTATCTTCACAGCACTACCTGTAATCATTGTTGGATTATTTGACAAGGATGTCAGTTCATCTCTATCCAAGAAGTATCCTGAACTATACATGGAAGGAATAAGAAATGTTTTCTTTAAATGGAAAGTTGTGGCAATATGGGCATTCTTTTCTATATACCAGTCTCTAGTATTCTTCTATTTTGTGAGTACAACAAACTTAAGTGCTAAAAACTCAGCAGGCAAGATATTTGGATTATGGGATGTTAGTACAATGGCCTTCACTTGTGTTGTAATAACCGTCAACTTGCGACTGCTTATGATTTGTAATTCCATCACTAGATGGCACTATATTAGTGTTGGTGGAAGTATATTGGCCTGGTTTATTTTTATTTTTATATATTCAGGGATTAGCACTCCTTATGATCGTCAGGAAAATATTTATTTTGTCATATATGTCTTGATGACTACGTTCTACTTCTACGTCATGCTAATTCTAGTTCCCGTTGCTGCACTTTTCTGCGATTTTGTTTACCAAGGGGTTCAAAGATGGTTCTTCCCCTATGATTATCAGATTATTCAAGAAATGCACAGAGATGAGGTAGATAACACAGGTAGGGCACAGTTGTTGGAGATAGGGAACCAGCTTACGCCAGCTGAGGCAAGGAGTTATGCAATATCTCAACTCCCGCGTGAGATATCAAAGCACACCGGGTTCGCTTTTGATTCACCTGGGTACGAATCCTTTTTTGCCGCACAGCTTGGTGTATATGCCCCACCCAAGGCATGGGATGTTGCAAGACGAGCCAGCATGAGATCGCGGCCCAAGATTGGGCATCACAAGTAA 3243 0.3913 MDVTNIVHARELTINYTLLQVKQDGFFPADLLFLASTNSDGVCYIETANLDGETNLKIRKALEKTWDYVTPDKASEFKGEIQCEQPNNSLYTFTGNLISQKQTLPLSPNQILLRGCSLRNTEYIVGVVVFTGHETKVMMNTMNVPSKRSTLERKLDKLILTLFATLFMMCFIGAIGSAIFVNKKYFYLHLDSSEEGSAQFNPRNRFLVFILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLSMYHAETNTPALARTSNLNEELGQVEYVFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIERGLAERSGMKIEENTSSKAVHERGFNFDDARLMRGAWRNEPNPDVCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKHFGFFFYRRTPTMIYVRESHVEKMGKIQDMCYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERMADSSNNIKKVTREHLEQFGSAGLRTLCLAYKELHPDVYESWNEKFIQAKSSLNDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQYVISSETDAIREVEDRGDQVEIARFIKEEVKKELKRCLQEAQNYFHSSSGPKLALVIDGKCLMYALDPSLRVMLLNISLNCHSVVCCRVSPLQKAQVTSMVKKGAQKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSSSLSKKYPELYMEGIRNVFFKWKVVAIWAFFSIYQSLVFFYFVSTTNLSAKNSAGKIFGLWDVSTMAFTCVVITVNLRLLMICNSITRWHYISVGGSILAWFIFIFIYSGISTPYDRQENIYFVIYVLMTTFYFYVMLILVPVAALFCDFVYQGVQRWFFPYDYQIIQEMHRDEVDNTGRAQLLEIGNQLTPAEARSYAISQLPREISKHTGFAFDSPGYESFFAAQLGVYAPPKAWDVARRASMRSRPKIGHHK* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0746 1080 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 18 994 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Pvu3g0746 1080 ProSitePatterns E1-E2 ATPases phosphorylation site. 279 285 IPR018303 -
Pvu3g0746 1080 Gene3D - 541 748 IPR023214 -
Pvu3g0746 1080 SFLD p-type atpase 259 759 IPR044492 -
Pvu3g0746 1080 SUPERFAMILY Calcium ATPase, transmembrane domain M 142 986 IPR023298 -
Pvu3g0746 1080 Gene3D - 407 540 IPR023299 GO:0000166
Pvu3g0746 1080 SUPERFAMILY HAD-like 272 764 IPR036412 -
Pvu3g0746 1080 CDD P-type_ATPase_APLT_Dnf-like 21 868 - -
Pvu3g0746 1080 Pfam Cation transport ATPase (P-type) 374 468 - -
Pvu3g0746 1080 SFLD C1.7: P-type atpase like 259 759 - -
Pvu3g0746 1080 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 18 1076 - -
Pvu3g0746 1080 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 680 787 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu3g0746 1080 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 341 546 IPR023299 GO:0000166
Pvu3g0746 1080 SUPERFAMILY Calcium ATPase, transduction domain A 18 138 IPR008250 -
Pvu3g0746 1080 Pfam Phospholipid-translocating P-type ATPase C-terminal 736 986 IPR032630 -
Pvu3g0746 1080 Gene3D - 17 143 - -
Pvu3g0746 1080 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 18 1076 - -
Pvu3g0746 1080 PRINTS P-type cation-transporting ATPase superfamily signature 277 291 - -
Pvu3g0746 1080 PRINTS P-type cation-transporting ATPase superfamily signature 708 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0746 Pvu-Chr3 10903661 10916157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0746 18 1076 Primary Pumps ATPases AT1G59820 79.528 0.0 1818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0746 K14802 - gmx:100815547 2042.31