Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0744 ATGGATCCGGGTGCGATGATGAACGAGGGTTCCTATGCGAATAATGGGAGCGGCAATACGGCGCCGTATAGCTTGGCGGAGATCTGGCAGTTTCCGCAAGCGATTAATGGCGGCGGGGGATTGGGTCTCCGAAGCCCGCAGTTCGGACATGGGCCGGGGCAGTTTGGGGATTTCGCTCCCGGACCCAACAATGGGCTTGGGCCCAGTAACACCAGAAAGCGGCGAGACTCCGAGGACGATTCCGCTAAGGCCGTGTCCACCAGCAATGCCGTGAATGAGGGTGATGGAAAACGTGTTAAAGCAACGGGGAATGGTGATGGTAAAGGTGAAGGAGAAGTCAGTTCAGGAAAGCCTGCGGAGCAAAGCGCAAAGCCTCCTTCGGAAGCTCCCAAGCAAGATTACATTCACGTCCGAGCCAGAAGGGGTCAAGCCACTGATAGCCACAGTCTTGCAGAACGAGCTCGAAGGGAAAAGATTAGTGAGAGGATGAAAATTCTTCAGGATTTGGTCCCTGGTTGTAATAAGGTTATCGGGAAAGCGTTGGTCCTTGATGAGATAATTAATTATATCCAATCTCTTCAGCGCCAAGTTGAGTTTTTGTCAATGAAGCTTGAAGCAGTGAATTCGAGACTGAACTCCGGTATCGAAGCCTTTCCTCCTAAGGATTTTGGCCAGCATGCATTTGATCCCGCGGGCATACCGTTCGGTTCACAAGCTCCAAGAGAGTACAGCAGAGGTTCTTCACCTGAATGGTTACATATGCAGGTAGGAGGTGGTTTTGAAAGAACAACGTAG 795 0.5145 MDPGAMMNEGSYANNGSGNTAPYSLAEIWQFPQAINGGGGLGLRSPQFGHGPGQFGDFAPGPNNGLGPSNTRKRRDSEDDSAKAVSTSNAVNEGDGKRVKATGNGDGKGEGEVSSGKPAEQSAKPPSEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNSGIEAFPPKDFGQHAFDPAGIPFGSQAPREYSRGSSPEWLHMQVGGGFERTT* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0744 264 Pfam Helix-loop-helix DNA-binding domain 147 194 IPR011598 GO:0046983
Pvu3g0744 264 Coils Coil 190 210 - -
Pvu3g0744 264 Gene3D - 140 216 IPR036638 GO:0046983
Pvu3g0744 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 210 IPR036638 GO:0046983
Pvu3g0744 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 193 IPR011598 GO:0046983
Pvu3g0744 264 MobiDBLite consensus disorder prediction 38 132 - -
Pvu3g0744 264 CDD bHLH_AtBPE_like 133 218 - -
Pvu3g0744 264 SMART finulus 149 199 IPR011598 GO:0046983
Pvu3g0744 264 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 264 IPR024097 GO:0006355
Pvu3g0744 264 PANTHER BNAC05G07950D PROTEIN 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0744 Pvu-Chr3 10876079 10878584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0744 1 222 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 60.759 5.30e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pvu3g0744 HLH 2.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0744 - - gmx:100784478 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0821 2 11874672 11878409 Pvu3g0744 3 10876079 10878584 PCT