Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0737 ATGTCAATGAAGAGTGAGGTGAAGTTGTTGGGAGCATGGCCAAGTCCATACGTGTTGAGGGTTCGCATAGCTCTAAACATGAAATCAGTAGAGTATGAGTTCCATGAGGAAAAGTTATCGTCCAAAAGCCAGCTTCTTCTTCAATCCAACCCCATCTACAAGAAAATCCCTGTTCTAATTCATAAGGACAAACCCCTCTGCGAATCTTTGATCATTGTGCAATATGTTGATGATGTTTGGTCCTCTGCCTCTCCCATTCTCCCCTCTCATCCTTATGACTGCGCCATTGCTCGTTTCTGGGCTGTCTATATTGATCAAACGTTGTACCCAACCATGAAATCCATTAGAGGAGCTTCGGAGGAGGATGAGAAGAAGAGATTGATAGAGGAGGTGAGAAAAGGATTGGCATTGTTGGAGGATGTGTTTAAAGATAGAAGCAAAGGCAAGGGCTTTTATGGTGGTGACCGAATTGGGTTGTTGGACATTGCACTTGGTAGCATCTTGGGGTGGCTGAGGGTGGTAGAGACATTGAATGGGGTGAAGTTGCTTGAGCAAAGCAACACACCTGAGCTGCTGAAGTGGGCTGAAAGGTTTTCTGCACATGCTGCTGTCAAAGATGTTATGCCAGAGACAGAGAGGCTTCTTGAGTTTTCCAAAACTCTAGTTAAGGGCTAA 675 0.4504 MSMKSEVKLLGAWPSPYVLRVRIALNMKSVEYEFHEEKLSSKSQLLLQSNPIYKKIPVLIHKDKPLCESLIIVQYVDDVWSSASPILPSHPYDCAIARFWAVYIDQTLYPTMKSIRGASEEDEKKRLIEEVRKGLALLEDVFKDRSKGKGFYGGDRIGLLDIALGSILGWLRVVETLNGVKLLEQSNTPELLKWAERFSAHAAVKDVMPETERLLEFSKTLVKG* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0737 224 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Pvu3g0737 224 SFLD Glutathione Transferase (cytosolic) 3 221 IPR040079 -
Pvu3g0737 224 SUPERFAMILY GST C-terminal domain-like 78 222 IPR036282 -
Pvu3g0737 224 SUPERFAMILY Thioredoxin-like 7 109 IPR036249 -
Pvu3g0737 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
Pvu3g0737 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 219 IPR045073 -
Pvu3g0737 224 Pfam Glutathione S-transferase, C-terminal domain 99 201 IPR004046 -
Pvu3g0737 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Pvu3g0737 224 Gene3D Glutaredoxin 1 86 - -
Pvu3g0737 224 Gene3D - 87 224 - -
Pvu3g0737 224 CDD GST_C_Tau 91 221 IPR045074 GO:0004364|GO:0006749
Pvu3g0737 224 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 219 - -
Pvu3g0737 224 CDD GST_N_Tau 7 80 - -
Pvu3g0737 224 SFLD Main.3: Omega- and Tau-like 3 221 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0737 Pvu-Chr3 10743980 10745257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0737 5 221 Glutathione S-transferase Gene Family AT1G10370 57.339 5.59e-87 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0737 K00799 - aip:107635803 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0830 2 12048495 12049915 Pvu3g0737 3 10743980 10745257 PCT
Pvu3g0737 3 10743980 10745257 Pvu2g0829 2 12035839 12036834 PCT