Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu3g0713 | ATGGCGATAAGGCAGAATCTTTTGGTTCTGCTTTCTTTGGCAGTCTTAATCCCTACCTTGAATGCCAATACCTTGGAGAGTGAAGAGTATTGGCAGAAGCATGAGAACGAGTTTGATCCATACTGGAAGGGAAGGGCAGAAACGGCTGCAGTGGACAATAATGCAGCATATTTTCCTGATCCATATTCAGTCTCCGGAAACCTCTCTTCCAGTGTTAGCGAACTTATAGTTGGGAAGGATAAGAGAAGGAACTTGAAGGGACAACGTTATACTGGTCCATGCATGGCCACCAACCCCATTGACAGATGCTGGAGGTGTGACCCCAACTGGGCCAACAACAGGCAGAAGCTTGCAGATTGCGTTCAGGGCTTTGGAAGAAACACTGTTGGAGGAAAGGGTGGTCCATTCTACGTGGTCACTGACCCTTCAGATGACAACATGGTGGACCTAAAGCCAGGAACTCTTCGCCATGCAGTTACACGTACTGGCCCATTGTGGATTATCTTTGAACGCAGCATGATGATCAAACTCAAGCAGGAGCTCATCATGACCAGCGATAAGACCATTGATGGAAGAGGCGTTGAGGTCTACATTGCCAGTGGTGCTGGCATCACCGTCCAGTTTATCCGCAACGTCATCATCCATGGAATTAAGGTCTACGACATTCAGGTTCATGGGGGTGGAATGATCAGAGATTCCGAGACACATTATGGGCTGAGGACTCAGAGTGATGGAGATGGCATTTCCATCTTTGGTTCTAGCAATATCTGGATCGATCATGTTTCCATGAGAAATTGCTATGATGGACTTATTGATGCCATCATGGGATCCACTGCCATTACCATCTCCAACAGCCATTTCACAGACCACAACGAGGCGATGCTCTTCGGTGCCAGTGACAGCTATGATAAGGATAAGATCATGCAAATCACTCTTGCATTCAACCACTTCGGGAAGAGATTAGTTCAAAGGATGCCCAGATGCAGATATGGTTTCGTCCATGTGGTTAACAACGATTACACTCACTGGGAAATGTATGCCATTGGTGGCAGCAAGCACCCCACAATCATCAGCGAGGGTAACAGATTCATTGGCCCTGACAACGTACATGCGAAAGAGATCACAAAGAGAGAATACAGTCCTGAGAGCGAGTGGTCATCATGGCAGTGGAGATCAATCAACGATGAGTACATGAACGGAGCATTTTTTGTGCAATCTGGGCCTGAGCTTGTTGATAGACCCTTCTCAAGGCAAGACATGATCAAAGCCAAGCCAGGAAGTTACGTGGGAAGGCTCACACGCTATGCTGGCAGCCTTAGTTGCAGAGTCGGTCTTCCTTGCTAA | 1344 | 0.4747 | MAIRQNLLVLLSLAVLIPTLNANTLESEEYWQKHENEFDPYWKGRAETAAVDNNAAYFPDPYSVSGNLSSSVSELIVGKDKRRNLKGQRYTGPCMATNPIDRCWRCDPNWANNRQKLADCVQGFGRNTVGGKGGPFYVVTDPSDDNMVDLKPGTLRHAVTRTGPLWIIFERSMMIKLKQELIMTSDKTIDGRGVEVYIASGAGITVQFIRNVIIHGIKVYDIQVHGGGMIRDSETHYGLRTQSDGDGISIFGSSNIWIDHVSMRNCYDGLIDAIMGSTAITISNSHFTDHNEAMLFGASDSYDKDKIMQITLAFNHFGKRLVQRMPRCRYGFVHVVNNDYTHWEMYAIGGSKHPTIISEGNRFIGPDNVHAKEITKREYSPESEWSSWQWRSINDEYMNGAFFVQSGPELVDRPFSRQDMIKAKPGSYVGRLTRYAGSLSCRVGLPC* | 448 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu3g0713 | 447 | PRINTS | Pollen allergen Amb family signature | 120 | 137 | IPR018082 | - | |
Pvu3g0713 | 447 | PRINTS | Pollen allergen Amb family signature | 144 | 169 | IPR018082 | - | |
Pvu3g0713 | 447 | PRINTS | Pollen allergen Amb family signature | 180 | 196 | IPR018082 | - | |
Pvu3g0713 | 447 | PRINTS | Pollen allergen Amb family signature | 244 | 265 | IPR018082 | - | |
Pvu3g0713 | 447 | PRINTS | Pollen allergen Amb family signature | 324 | 343 | IPR018082 | - | |
Pvu3g0713 | 447 | PRINTS | Pollen allergen Amb family signature | 346 | 365 | IPR018082 | - | |
Pvu3g0713 | 447 | PRINTS | Pollen allergen Amb family signature | 388 | 412 | IPR018082 | - | |
Pvu3g0713 | 447 | PRINTS | Pollen allergen Amb family signature | 418 | 441 | IPR018082 | - | |
Pvu3g0713 | 447 | Pfam | Pectate lyase, N terminus | 37 | 85 | IPR007524 | GO:0030570 | |
Pvu3g0713 | 447 | SUPERFAMILY | Pectin lyase-like | 98 | 438 | IPR011050 | - | |
Pvu3g0713 | 447 | PANTHER | PECTATE LYASE | 4 | 447 | - | - | |
Pvu3g0713 | 447 | Pfam | Pectate lyase | 182 | 363 | IPR002022 | - | |
Pvu3g0713 | 447 | PANTHER | PECTATE LYASE 18-RELATED | 4 | 447 | IPR045032 | GO:0030570 | |
Pvu3g0713 | 447 | SMART | amb_all | 172 | 369 | IPR002022 | - | |
Pvu3g0713 | 447 | Gene3D | - | 97 | 440 | IPR012334 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu3g0713 | Pvu-Chr3 | 10221435 | 10223313 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu3g0713 | 38 | 447 | Polysaccharide Lyase | AT1G14420 | 60.798 | 0.0 | 528 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu3g0713 | K01728 | - | gmx:100798579 | 740.339 |