Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0712 ATGGAGCTTGCACCTGTGAAATCTGAACTGAGCCCAAGAAGCCATAGGTTGCTGGTGATAGATGGTAGTGAGGTTATTGCTACCAAGTGTGTCAAAAGGAGGCGAAGAGGTTCGTCTATGTCAGTGTTAGGTGGCAATGAACAACAAGGTGAAAAGTTAGAAGAACATAAGCAACTTGGTACTGCCACCACTGTGAAGAGAAGTTCAAGGTTCAGGGGTGTTAGCAGACACAGGTGGACTGGAAGGTTTGAAGCACATCTATGGGATAAAGGGACCTGGAATCCCACTCAGAAGAAGAAAGGAAAGCAAGTATATTTGGGAGCTTATAATGATGAAGAAGCAGCTGCTAGAGCTTATGATTTGGCTGCACTCAAGTACTGGGGAACATCAACTTTCACAAATTTTCCTGTATCTGATTATGACAAAGAAATTGAGATAATGAAAACAGTAACCAAAGAAGAGTATCTTGCTTCACTGAGAAGTGGTTTTTCCAGAGGTGTATCAAAGTATAGAGGAGTAGCAAGGCACCATCACAATGGAAGATGGGAAGCAAGAATTGGGAGAGTGTTTGGCAACAAGTACCTCTACCTTGGGACTTACAGTACACAAGAAGAAGCAGCTCGTGCATATGACATTGCAGCAATTGAGTACAGAGGCATAAATGCTGTGACAAACTTTGACTTGAGCACCTACATCAGATGGCTAAGACCAGGAACACATCCTATAGCTTCACATGATCAAAAGCCTAGCACAGACCCTCAACCCTTTGCTACCTCTAAATCAATGCAAACAAGAGGGAACATTGATGTATCCAACTCTAACATGCATTCATTCTCCTCAGCTGAATTGGACAGTACGAAGAAGCAAGACTTTTCCAAGTATATAAACCCTCTGAGTCCTTGCAACAAACCATCTTCTCCAACTGCATTAGGACTTCTCCTAAAATCAACAGTGTTTAGAGAATTGATGCAGAGAAATCTGAACTCCTCTAGTGAGGAAGCTGAAGAAGTTGAATTGAAATACCCACAAGAAGGCAATGATGCAAATGGAGGGATTTATTATAGTGACAACACCAGTAACTCTTACTTTTGCTCTTCTCTTATCAACAGATTACCGAACCTGGAGTCACCAGAAGAGACTTCATTGCCTGTGTATCATGGAACTGTGCAATCCGGATGGAGCAGTTCTTTCAACATGTCTAACTGA 1206 0.4221 MELAPVKSELSPRSHRLLVIDGSEVIATKCVKRRRRGSSMSVLGGNEQQGEKLEEHKQLGTATTVKRSSRFRGVSRHRWTGRFEAHLWDKGTWNPTQKKKGKQVYLGAYNDEEAAARAYDLAALKYWGTSTFTNFPVSDYDKEIEIMKTVTKEEYLASLRSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGTHPIASHDQKPSTDPQPFATSKSMQTRGNIDVSNSNMHSFSSAELDSTKKQDFSKYINPLSPCNKPSSPTALGLLLKSTVFRELMQRNLNSSSEEAEEVELKYPQEGNDANGGIYYSDNTSNSYFCSSLINRLPNLESPEETSLPVYHGTVQSGWSSSFNMSN* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0712 401 SMART rav1_2 169 233 IPR001471 GO:0003700|GO:0006355
Pvu3g0712 401 SMART rav1_2 70 142 IPR001471 GO:0003700|GO:0006355
Pvu3g0712 401 MobiDBLite consensus disorder prediction 244 284 - -
Pvu3g0712 401 ProSiteProfiles AP2/ERF domain profile. 169 227 IPR001471 GO:0003700|GO:0006355
Pvu3g0712 401 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Pvu3g0712 401 PRINTS Ethylene responsive element binding protein signature 209 229 IPR001471 GO:0003700|GO:0006355
Pvu3g0712 401 SUPERFAMILY DNA-binding domain 168 229 IPR016177 GO:0003677
Pvu3g0712 401 MobiDBLite consensus disorder prediction 241 284 - -
Pvu3g0712 401 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 395 - -
Pvu3g0712 401 SUPERFAMILY DNA-binding domain 69 138 IPR016177 GO:0003677
Pvu3g0712 401 ProSiteProfiles AP2/ERF domain profile. 70 136 IPR001471 GO:0003700|GO:0006355
Pvu3g0712 401 MobiDBLite consensus disorder prediction 37 62 - -
Pvu3g0712 401 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 395 - -
Pvu3g0712 401 CDD AP2 168 229 IPR001471 GO:0003700|GO:0006355
Pvu3g0712 401 Pfam AP2 domain 168 219 IPR001471 GO:0003700|GO:0006355
Pvu3g0712 401 Pfam AP2 domain 69 128 IPR001471 GO:0003700|GO:0006355
Pvu3g0712 401 Gene3D AP2/ERF domain 168 229 IPR036955 GO:0003700|GO:0006355
Pvu3g0712 401 Gene3D AP2/ERF domain 69 138 IPR036955 GO:0003700|GO:0006355
Pvu3g0712 401 Coils Coil 320 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0712 Pvu-Chr3 10190940 10193616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0712 66 283 AP2-EREBP Transcription Factor Family AT5G57390 57.207 9.22e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pvu3g0712 AP2 5.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0712 - - gmx:100798483 721.079