Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu3g0709 | ATGCAGGATCATAAGCTCGAAAGGGAAATGCGAGAGGTTGGAGAAGGAAACGATAACTTGAAACTTTCATTGGTAAGGGATTCAACTAGTGATGAAGAAAGTGAACTTGTTTCCCTTTCTCTTGGAATTTCATCTACAGGTAAACATGAGAAGAATAATAGAACTGAAAAGATCAGAGAAAATGAGGATTTGAAGGAAGGACTTTCACTTGGGTTAGATATAAGATTTGACCCTTCAGCTATAAAAAATCACAGCACTGAAAGTAGGTGTGATGGGGAAAGGAAGGAAGAGGAGCTCAGAGTGATATGGCCACCCAGTAAAGTTCTCAAGAGAACTTGGGATAAAAGTGAAGCTTCTCAACATGTTGAAGTCAAGAAGGCTAGGGTTTGTATCAGAGCTAGATGTGATACCCTCACGATGAATGATGGTTGCCAATGGAGAAAATATGGACAAAAAATGGCAAAAGGGAATCCGTGCCCTCGAGCATACTATCGATGCACTGTCTCTCCATCATGTCCTGTGAAAAAACAAGTTCAAAGATGTGCTGAAGACATGTCAATCTTGATTACCACCTACGAAGGAACTCACAACCACCCTCTTCCTACTTCAGCCACTACCATAGCCTACACAACTTCTGCTGCTGCTTCCATGCTTCAGTCTCCCTCTTTGACCACACAACTAGGACTAGCCAATTCAGATACTGTCCCTCTCATCAGTTCTAGTGTTCCTTGTAACCTTAATGCTCTAAACTTCACATCAAGCTATCACCACCTTTCAAAATCACCACACCTATACTTCCACACCTCATCTATTTCTACCTCTAATTCTCATCCCACAGTCACTCTTGACCTTGCCACTCCTCAAACCTCACCTCACATTGGAAAATTCACCCCAAGCTTGTCTTTCATACCAAAATATTCATCAACCAATGTTGATTTTTCCTCGAGTACCTTCTCTCCTTTGCAATCTAGTATGCTACACTCACCTTGCTATGGTGATTACTTCAACTACGGGGGATTGATCACCCCAAATAGAAACCATAATGGTTCCCTTATGAACACCGGAAAACAACCATTCCTGGGGCATCTTTGTCAATCTAATCACATTAGCAACCACACCATATCTAAACAACCTCTACCTGATTCCATTGTAGCTGCAACCAAAGCAATCACTGCTGCCCCAAAATTTCAATCTGCAATATTAGCAGCTGCCCTCACAGCATATGCTGGTAATGGGGTAAGAGAAAATCATGAGAGGCACAGAGTGCAGAGAATGTCATTTTCTGCTCCTAGTGCTCCGAAAAGAGACTCGGTGATATTTCAACCATCACATGCATCTAAAAGCTCCTTTGGATCTTCGTCTAGTAAAAGTAACCTATTCTTAGATCAATAG | 1392 | 0.4181 | MQDHKLEREMREVGEGNDNLKLSLVRDSTSDEESELVSLSLGISSTGKHEKNNRTEKIRENEDLKEGLSLGLDIRFDPSAIKNHSTESRCDGERKEEELRVIWPPSKVLKRTWDKSEASQHVEVKKARVCIRARCDTLTMNDGCQWRKYGQKMAKGNPCPRAYYRCTVSPSCPVKKQVQRCAEDMSILITTYEGTHNHPLPTSATTIAYTTSAAASMLQSPSLTTQLGLANSDTVPLISSSVPCNLNALNFTSSYHHLSKSPHLYFHTSSISTSNSHPTVTLDLATPQTSPHIGKFTPSLSFIPKYSSTNVDFSSSTFSPLQSSMLHSPCYGDYFNYGGLITPNRNHNGSLMNTGKQPFLGHLCQSNHISNHTISKQPLPDSIVAATKAITAAPKFQSAILAAALTAYAGNGVRENHERHRVQRMSFSAPSAPKRDSVIFQPSHASKSSFGSSSSKSNLFLDQ* | 464 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu3g0709 | 463 | PANTHER | WRKY TRANSCRIPTION FACTOR 72B | 2 | 453 | - | - | |
Pvu3g0709 | 463 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 2 | 453 | IPR044810 | GO:0003700 | |
Pvu3g0709 | 463 | MobiDBLite | consensus disorder prediction | 416 | 463 | - | - | |
Pvu3g0709 | 463 | Gene3D | WRKY domain | 125 | 202 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu3g0709 | 463 | ProSiteProfiles | WRKY domain profile. | 135 | 201 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu3g0709 | 463 | SUPERFAMILY | WRKY DNA-binding domain | 134 | 201 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu3g0709 | 463 | SMART | WRKY_cls | 140 | 200 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu3g0709 | 463 | Pfam | WRKY DNA -binding domain | 141 | 199 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu3g0709 | 463 | MobiDBLite | consensus disorder prediction | 441 | 463 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu3g0709 | Pvu-Chr3 | 10126584 | 10128409 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu3g0709 | 28 | 415 | WRKY Transcription Factor Family | AT5G15130 | 40.288 | 9.48e-60 | 202 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Pvu3g0709 | WRKY | 2.6e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu3g0709 | - | - | gmx:102666229 | 650.588 |