Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0709 ATGCAGGATCATAAGCTCGAAAGGGAAATGCGAGAGGTTGGAGAAGGAAACGATAACTTGAAACTTTCATTGGTAAGGGATTCAACTAGTGATGAAGAAAGTGAACTTGTTTCCCTTTCTCTTGGAATTTCATCTACAGGTAAACATGAGAAGAATAATAGAACTGAAAAGATCAGAGAAAATGAGGATTTGAAGGAAGGACTTTCACTTGGGTTAGATATAAGATTTGACCCTTCAGCTATAAAAAATCACAGCACTGAAAGTAGGTGTGATGGGGAAAGGAAGGAAGAGGAGCTCAGAGTGATATGGCCACCCAGTAAAGTTCTCAAGAGAACTTGGGATAAAAGTGAAGCTTCTCAACATGTTGAAGTCAAGAAGGCTAGGGTTTGTATCAGAGCTAGATGTGATACCCTCACGATGAATGATGGTTGCCAATGGAGAAAATATGGACAAAAAATGGCAAAAGGGAATCCGTGCCCTCGAGCATACTATCGATGCACTGTCTCTCCATCATGTCCTGTGAAAAAACAAGTTCAAAGATGTGCTGAAGACATGTCAATCTTGATTACCACCTACGAAGGAACTCACAACCACCCTCTTCCTACTTCAGCCACTACCATAGCCTACACAACTTCTGCTGCTGCTTCCATGCTTCAGTCTCCCTCTTTGACCACACAACTAGGACTAGCCAATTCAGATACTGTCCCTCTCATCAGTTCTAGTGTTCCTTGTAACCTTAATGCTCTAAACTTCACATCAAGCTATCACCACCTTTCAAAATCACCACACCTATACTTCCACACCTCATCTATTTCTACCTCTAATTCTCATCCCACAGTCACTCTTGACCTTGCCACTCCTCAAACCTCACCTCACATTGGAAAATTCACCCCAAGCTTGTCTTTCATACCAAAATATTCATCAACCAATGTTGATTTTTCCTCGAGTACCTTCTCTCCTTTGCAATCTAGTATGCTACACTCACCTTGCTATGGTGATTACTTCAACTACGGGGGATTGATCACCCCAAATAGAAACCATAATGGTTCCCTTATGAACACCGGAAAACAACCATTCCTGGGGCATCTTTGTCAATCTAATCACATTAGCAACCACACCATATCTAAACAACCTCTACCTGATTCCATTGTAGCTGCAACCAAAGCAATCACTGCTGCCCCAAAATTTCAATCTGCAATATTAGCAGCTGCCCTCACAGCATATGCTGGTAATGGGGTAAGAGAAAATCATGAGAGGCACAGAGTGCAGAGAATGTCATTTTCTGCTCCTAGTGCTCCGAAAAGAGACTCGGTGATATTTCAACCATCACATGCATCTAAAAGCTCCTTTGGATCTTCGTCTAGTAAAAGTAACCTATTCTTAGATCAATAG 1392 0.4181 MQDHKLEREMREVGEGNDNLKLSLVRDSTSDEESELVSLSLGISSTGKHEKNNRTEKIRENEDLKEGLSLGLDIRFDPSAIKNHSTESRCDGERKEEELRVIWPPSKVLKRTWDKSEASQHVEVKKARVCIRARCDTLTMNDGCQWRKYGQKMAKGNPCPRAYYRCTVSPSCPVKKQVQRCAEDMSILITTYEGTHNHPLPTSATTIAYTTSAAASMLQSPSLTTQLGLANSDTVPLISSSVPCNLNALNFTSSYHHLSKSPHLYFHTSSISTSNSHPTVTLDLATPQTSPHIGKFTPSLSFIPKYSSTNVDFSSSTFSPLQSSMLHSPCYGDYFNYGGLITPNRNHNGSLMNTGKQPFLGHLCQSNHISNHTISKQPLPDSIVAATKAITAAPKFQSAILAAALTAYAGNGVRENHERHRVQRMSFSAPSAPKRDSVIFQPSHASKSSFGSSSSKSNLFLDQ* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0709 463 PANTHER WRKY TRANSCRIPTION FACTOR 72B 2 453 - -
Pvu3g0709 463 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 2 453 IPR044810 GO:0003700
Pvu3g0709 463 MobiDBLite consensus disorder prediction 416 463 - -
Pvu3g0709 463 Gene3D WRKY domain 125 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu3g0709 463 ProSiteProfiles WRKY domain profile. 135 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu3g0709 463 SUPERFAMILY WRKY DNA-binding domain 134 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu3g0709 463 SMART WRKY_cls 140 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu3g0709 463 Pfam WRKY DNA -binding domain 141 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu3g0709 463 MobiDBLite consensus disorder prediction 441 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0709 Pvu-Chr3 10126584 10128409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0709 28 415 WRKY Transcription Factor Family AT5G15130 40.288 9.48e-60 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu3g0709 WRKY 2.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0709 - - gmx:102666229 650.588