Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0705 ATGGGAAGACAGAGTCCTGGAAAATGGATCAGAAACTTCCTTCTGGGGAAGAAATCATCATCAAAGTCTAAGTCTTCTAGAGAGAAAGATATTTATAAACCTTCGAGTAACAAGGATGTTCTGGTGGTGTCTTCGGAGACATCCATGTCTGCTCCTATATCTGGTGCAAATGCTACTAAGCTATCAGAAAAGGCATCAAATGATGGGGTAATTCTTGCAACTGAAGATGAGCAGGCCAATGCACAATCTCTTGATAATTTTTATGGTGAGAACCATAATGAGAAAATCAGGCTAGTAGAAACAGCTATAACTATTCAGGCTGCTATTAGAAGTTATCAGGCAGGAGGAACTTATAAAGCAGTAAAAGGTATCATTCCACTGCAAGCTTATATTCGTGGCCAGTTGATTCGGAGACAAGCTATTTCTGCTTTGTATTGTGTGAAGTCAGTAGTTAGATTTCAAGCATTGGCCCGTGGTTACAAGGTTAGGCACTCTGAAATTGGCCTCGCAGTCCAGAAAATTTTTAAGGATACTAAATTGTTGAAATCTATTGGAGTAGTTACATCTACAGAGGCTGTGAAGCTCTCAGATAATATCTTTGTTAACAAGCTTCTGGCTTCATCACCCTCTGCTGTTTCTCCACATCTCAAATATAATACTGGGGAACCTAACTTGGCTTGGGAATGGCTTGACCGTTGGACGAAATCACACTTTTGGGTACCACTTAAAGAAGGGCAGAGATCTGATTCAGTGTCCGATAAGCAAATGGAAAGTTCTCAAACTGTAGAAACTAATAAGGGACAAGTTAAAAGAAATGCCAGGAAAGCACCTGCTTTGAGGGTTGGTCATGATTTAGTCTCAGATTCCAACAAACATAAACGGTATCCAAAAAAGGATTCAAACCCCGCATTGCATTCAGCTAAGGAACATCCAATAAAGGAACTTGAAAAAAGGAGTTCTAAAAAATCTCAAACTCAGAATGTTTCTGATAAGTCGGAGGCTTCTAATGAGAAGAGAACACACAACACAAGAAAAGTTTCAGATCAGACAAAAGCCAATGATATTCCAGAGGAGGATGGTGGTGCTTCATCAGAGAAGAAGAAATATCTGGCAGTGCCAAAGTCAGAAGAGTGTGATCTTGAGGAAAGTCCTGGACAGGAAGCACAAGAGCATGATAATAACGAGTCATGTAATGGTTTTAATTCTCCCTTGCAGCCTAGTTTGATGAATAGTAAAGATGGAGGAGTCATTGAGGAGTTCAATAATGTGAAGTGTAAGAATTTCCAGAGAAGAGCTTCCCTTCCTGCTAATTTTACAGATCTTGAAAATGTGTTGCCTAATAACACTCCAAGAGTTCCAAGTTATATGGCTCCCACTGAATCTACAAAAGCTAGGCTAAGAGGACAATGCTCTCCACGGTCTGTTACTGATCTGGCAGATGTAAGTAGTATAACTCGCCGGCTTTCACTTTCATCATCGCTTGGTGGCAAGCTAGGTTCGTTCTCTCCACGATCAGATAGATTTGCTTCCTTGAGCCACAAGATAAGGACTGATAGATCTCTATCATCTTCAAGGGATGGAACTGATAAGTTGATTCAACCTCAGTGGAGAAGGTGA 1617 0.4057 MGRQSPGKWIRNFLLGKKSSSKSKSSREKDIYKPSSNKDVLVVSSETSMSAPISGANATKLSEKASNDGVILATEDEQANAQSLDNFYGENHNEKIRLVETAITIQAAIRSYQAGGTYKAVKGIIPLQAYIRGQLIRRQAISALYCVKSVVRFQALARGYKVRHSEIGLAVQKIFKDTKLLKSIGVVTSTEAVKLSDNIFVNKLLASSPSAVSPHLKYNTGEPNLAWEWLDRWTKSHFWVPLKEGQRSDSVSDKQMESSQTVETNKGQVKRNARKAPALRVGHDLVSDSNKHKRYPKKDSNPALHSAKEHPIKELEKRSSKKSQTQNVSDKSEASNEKRTHNTRKVSDQTKANDIPEEDGGASSEKKKYLAVPKSEECDLEESPGQEAQEHDNNESCNGFNSPLQPSLMNSKDGGVIEEFNNVKCKNFQRRASLPANFTDLENVLPNNTPRVPSYMAPTESTKARLRGQCSPRSVTDLADVSSITRRLSLSSSLGGKLGSFSPRSDRFASLSHKIRTDRSLSSSRDGTDKLIQPQWRR* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0705 538 MobiDBLite consensus disorder prediction 332 389 - -
Pvu3g0705 538 MobiDBLite consensus disorder prediction 245 411 - -
Pvu3g0705 538 MobiDBLite consensus disorder prediction 512 538 - -
Pvu3g0705 538 Pfam Protein of unknown function (DUF4005) 447 510 IPR025064 -
Pvu3g0705 538 ProSiteProfiles IQ motif profile. 120 149 IPR000048 GO:0005515
Pvu3g0705 538 PANTHER IQ-DOMAIN 5-RELATED 1 535 - -
Pvu3g0705 538 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 535 - -
Pvu3g0705 538 MobiDBLite consensus disorder prediction 252 267 - -
Pvu3g0705 538 Pfam IQ calmodulin-binding motif 148 164 IPR000048 GO:0005515
Pvu3g0705 538 MobiDBLite consensus disorder prediction 285 324 - -
Pvu3g0705 538 MobiDBLite consensus disorder prediction 390 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0705 Pvu-Chr3 10066385 10071926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0705 1 538 IQD Protein Family AT1G14380 31.188 1.85e-60 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0705 - - vun:114179925 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0705 3 10066385 10071926 Pvu3g0705 3 10066385 10071926 ECH
Pvu3g0705 3 10066385 10071926 Pvu3g1981 3 40422342 40430126 ECH
Pvu3g0705 3 10066385 10071926 Pvu9g1957 9 28104208 28111942 ECH