Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0702 ATGTCCGCATCCACCAACGTCGTCGTTCTAGACAACGGCGGCGGGTTAATCAAGGCGGGCCTGGGCGGCGAACGCGACCCCGCCTCCGTGGTCCCTAACTGTCTCTACCGCCCCCCGGCCTCCAAGAAATGGCTCCACCTGACCTCCGGCGACGAGGACCTGACGTCCGCCGCCGTGCGCCGCCCCATGGACCGAGGATACCTGATAAACCCGGAGCTACAGCGCGAAATCTGGTCGCACCTCTTCTCCTCCGTTCTCCGCATTACGCCCTCGCAGTCCTCGCTCCTTCTCACGGAACCCCTCTTCACGCTCCCTTCCATCCAACGCTCCGTCGACGAGCTTGTCTTCGAAGACTTCAATTTCCGGGCTCTCTACGTGGCTCATCCCCCCGCCCTAGTCCACCTCCACGAGGCCACACGCCGGCCCAGTGGGCTTCTCTCCCGGGCTCAGTGCAGCCTCGTCGTGGACGCAGGGTTCTCCTTCATCCACGCCTCCCCCGTCTTTCACAACTTCCCTCTCAATTATGCCGTGAGGAGGATTGACTTGGGCGGCAAGGCCCTCACCAACTACCTCAAGGAACTCGTCTCCTTCCGCTCCGTCAACGTCATGGAAGAGACCTTCATCATCGACGACGTTAAGGAGAAGCTCTGCTTCGTCTCCCTCGACGTCGACCGCGACCTCTCCATCGCCAGGAAGAGTGGGAACGAGAATCTGTTCAGGTGCACCTATGTGCTTCCGGATGGTGTCACACACACAAAGGGGTTTGTTAAGTACCCAGACCAGGCACGGCAGTATCTTGCATTGAGGGAGAGTGGCCTTCCTTCTTCGCTGCCAGTGGAGGCAGAGGGGGGTATGAATTACTCGGAAATTGCCGAGCAGCCAAAGGACAGAAAAAGTGTTGATTTGTCAAAAAATGAGTTTGACGTCACAAATGAACGGTTTCTTGTTCCAGAGATGATCTTCCGCCCTGCTGATTTGGGAATGAACCAGGCTGGGCTAGCAGAATGCATTGTGCGGGCTGTTAATGCGTGCCACCCGCATCTCCATCCTGTACTCTACGAAAGCATAATATTAACGGGTGGAAGCACCTTATTTCCTCAGTTCGCTGAGAGATTAGAGAAGGAGCTTCGACCTCTAGTTCCTGATGACTATAATGTGGAGATAACAACTCAAGAAGATCCCATACTAGGTGTTTGGCGTGGAGGGTCACTGTTGGCATCGAGTCCAGATTTTGAAGCAATGTGTGTGACGAAGGCTGAGTATGAGGAGCTTGGTTCTGCTAGATGTCGCAAGAGATTCTTTCATTAA 1308 0.5543 MSASTNVVVLDNGGGLIKAGLGGERDPASVVPNCLYRPPASKKWLHLTSGDEDLTSAAVRRPMDRGYLINPELQREIWSHLFSSVLRITPSQSSLLLTEPLFTLPSIQRSVDELVFEDFNFRALYVAHPPALVHLHEATRRPSGLLSRAQCSLVVDAGFSFIHASPVFHNFPLNYAVRRIDLGGKALTNYLKELVSFRSVNVMEETFIIDDVKEKLCFVSLDVDRDLSIARKSGNENLFRCTYVLPDGVTHTKGFVKYPDQARQYLALRESGLPSSLPVEAEGGMNYSEIAEQPKDRKSVDLSKNEFDVTNERFLVPEMIFRPADLGMNQAGLAECIVRAVNACHPHLHPVLYESIILTGGSTLFPQFAERLEKELRPLVPDDYNVEITTQEDPILGVWRGGSLLASSPDFEAMCVTKAEYEELGSARCRKRFFH* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0702 435 Gene3D - 8 126 - -
Pvu3g0702 435 CDD NBD_sugar-kinase_HSP70_actin 8 194 - -
Pvu3g0702 435 SUPERFAMILY Actin-like ATPase domain 150 434 IPR043129 -
Pvu3g0702 435 Gene3D - 331 397 - -
Pvu3g0702 435 Gene3D Actin; Chain A, domain 4 291 330 - -
Pvu3g0702 435 Gene3D - 127 187 - -
Pvu3g0702 435 Gene3D - 398 426 - -
Pvu3g0702 435 PANTHER ACTIN 8 431 IPR004000 -
Pvu3g0702 435 SMART actin_3 5 434 IPR004000 -
Pvu3g0702 435 Pfam Actin 4 434 IPR004000 -
Pvu3g0702 435 Gene3D Actin; Chain A, domain 2 35 62 - -
Pvu3g0702 435 SUPERFAMILY Actin-like ATPase domain 5 135 IPR043129 -
Pvu3g0702 435 PANTHER ACTIN-RELATED PROTEIN 6 8 431 IPR030054 GO:0005634|GO:0006338
Pvu3g0702 435 Gene3D Actin; Chain A, domain 4 188 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0702 Pvu-Chr3 9972726 9975769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0702 8 434 Cytoskeleton Gene Families AT3G12110 27.563 1.79e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0702 K11662 - gmx:100819827 780.015