Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0700 ATGATGCCGCAAGATATGAAGCAGCACCATAATGAAGAGTCCACGAAGAAGGAGCACGGTGAAGAATCTAAAAAGAAGGAGCACGTTGAAGAATCTAAAAAGAAGGAGCACAACGAGGAATCTAAAAAGAAGGAGCGTCACATTGTGACTTGGACTCAAGAGGAGGATGATATACTAAGGGAGAGGATTGGTATTCATGGAACTGAAAATTGGGCAATTATTGCATCTAAGTTTAAAGACAAAACGACAAGACAGTGCAGAAGAAGATGGTACACGTACTTGAATTCTGATTTCAAGAAAGGTGGATGGTCAGCTGAGGAAGACATGCTCTTATGTGAGGCTCAAAAAATATTTGGTAACAGATGGACAGAAATAGCAAAGGTGGTTTCAGGCAGGACGGATAATGCTGTGAAAAACCGTTTCTCCACACTCTGCAGAAAGAAAGAAAAATATGCAGCATTAGCAAAAGAGAACGGCACATCATACATCAATTCAAATAACAAGAGAATTATGTTTGAACGTTATAATAACATGGATACAACAGCTGAATCTGGAGGACCTATTAAAAAGATGAGGAGGGCCCATATCCCTGATGATGCAGAAAAGATCAAATTTGGGGACCGATCACATTTAGGAAATGGAGCTCCAATAAATCAACAGCAAAGAGCACCATTTGCAGTATTAGCTCAAAACTCCAATAATTCAAACAGCTTGCCAGACCAGCAGCATGTTTGCAATCCCAAGCTTAATTCTGCCCAAGATAACCAGATTCAAGGAACATTTCTCAAAAGGGATGATCCAAAGAGAAGTGTATTGATGGAACAGGCAGAGTTACTAAGTTCACTAGCTCTAAAAGTTGATACTGAAAACATGGACCAAAGTCTTGAACACACTTGGAAGGTTCTTCAAGAGTTTCTGAACCTAAACAAAGAATCAGATATTCCTGGTCACAAGATTCCAGATTTACGGCTTGTAGATAAAGATACCACTAAGGACTTGAAGAGCGGTAATGAGGAAGGCCAGGCTTGTTGGAGGCAAGTGGAACAGTACGACTCTCCAAGCAGTTCTGGATACAGTACAGAATCAACTTTCCTTTGTCAGTCAGCCGGTGATAATTCAGAGCACCCATTGCATCAGGATATTGGAACTGAAATGAAGTCTGAACAACTTGGAGATGAAAAAGGAGTAGGCAGAGATGAGAAAGGGGTTCTTTGTACTGCAAATGTGGATAAAGATATGTTGCCATATTGTGAGGAACAGATAAACAATGACTTGATTGTTTCTACCTCATCAAGATTGGAGTTCAGCTCCCCTATTCAAGTAACCCCTCTGTTCAGATCCTTGGCAGCAGGAATTCCCAGCCCACAATTTTCCGAAAGTGAAAGGAACTTCTTAAGGAAAACACTAGGAGTGGAATCTCCATCCATCAACCCAAGTGCCAACTCATCACAACCGCCACCCTGCAAAAGAGCCCTACTACCAAGTCTATAA 1491 0.4118 MMPQDMKQHHNEESTKKEHGEESKKKEHVEESKKKEHNEESKKKERHIVTWTQEEDDILRERIGIHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSAEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCRKKEKYAALAKENGTSYINSNNKRIMFERYNNMDTTAESGGPIKKMRRAHIPDDAEKIKFGDRSHLGNGAPINQQQRAPFAVLAQNSNNSNSLPDQQHVCNPKLNSAQDNQIQGTFLKRDDPKRSVLMEQAELLSSLALKVDTENMDQSLEHTWKVLQEFLNLNKESDIPGHKIPDLRLVDKDTTKDLKSGNEEGQACWRQVEQYDSPSSSGYSTESTFLCQSAGDNSEHPLHQDIGTEMKSEQLGDEKGVGRDEKGVLCTANVDKDMLPYCEEQINNDLIVSTSSRLEFSSPIQVTPLFRSLAAGIPSPQFSESERNFLRKTLGVESPSINPSANSSQPPPCKRALLPSL* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0700 496 Gene3D - 102 171 - -
Pvu3g0700 496 MobiDBLite consensus disorder prediction 1 47 - -
Pvu3g0700 496 CDD SANT 50 94 IPR001005 -
Pvu3g0700 496 PANTHER TRANSCRIPTION FACTOR MYB88 31 493 - -
Pvu3g0700 496 Gene3D - 38 99 - -
Pvu3g0700 496 ProSiteProfiles Myb-like domain profile. 95 145 IPR001005 -
Pvu3g0700 496 SMART sant 47 96 IPR001005 -
Pvu3g0700 496 SMART sant 99 147 IPR001005 -
Pvu3g0700 496 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 149 IPR017930 -
Pvu3g0700 496 SUPERFAMILY Homeodomain-like 47 141 IPR009057 -
Pvu3g0700 496 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 94 IPR017930 -
Pvu3g0700 496 PANTHER MYB PROTEIN-RELATED 31 493 - -
Pvu3g0700 496 MobiDBLite consensus disorder prediction 472 488 - -
Pvu3g0700 496 CDD SANT 103 144 IPR001005 -
Pvu3g0700 496 ProSiteProfiles Myb-like domain profile. 51 94 IPR001005 -
Pvu3g0700 496 Pfam Myb-like DNA-binding domain 51 111 - -
Pvu3g0700 496 MobiDBLite consensus disorder prediction 472 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0700 Pvu-Chr3 9942567 9948257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0700 37 345 MYB Transcription Factor Family AT2G02820 59.236 1.07e-129 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu3g0700 Myb_DNA-bind_6 6.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0700 K09422 - gmx:100807667 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0700 3 9942567 9948257 Pvu3g0700 3 9942567 9948257 ECH
Pvu3g0700 3 9942567 9948257 Pvu2g0917 2 14657972 14664897 PCT