Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0668 ATGGAAGAAGCACTGCGTCGTCTCAACGGAGTCACACCCTCTCAAGAACCTGACCTCGTTTCAGACCCTCACCCGAAGAAGTGTGCCGCTAAGCGCACCTTGCGTGACACCGCCAACTCCGGCACCGCCATGCGCTACCGTGGAGTTCGCCGCCGTCCCTGGGGCCGCTATGCTGCCGAGATCCGCGACCCGCAATCCAAGGAGCGCCGCTGGCTCGGCACCTTTGACACCGCCGAGGAGGCTGCCTGTGCCTACGACTGCGCCGCCCGAGCCATGCGCGGTGTCAAGGCCCGCACCAACTTCGTGTACCCTGACGCTGCCGATCCCCACCTCTTCCATCCCTTCAATCTCCCCAAACACTGCCACGTCAGCAGGTTTCCCCATAACACGAACTTGGGGAGTGATTTTCCTGCAAGTTCCCACCACAGCGCTTCTTCTTCTTCTTCGTCTCTCAACATGCTTCTCTTTCGTGACTTCCTTAATTCTTCTTCTAACCCGTGTCTGCTTTCTTCTGCTCCTTCTCAGCAGTTTCATAATAACAAATCTGCTAGTTGTTATGTAAACTCTTCATCTCCGTCTCTATCTTCTTCTACTGCTACTAACTGTCTCCAAGGTTGTTGTGTCGGCAACGCTAATAGCTACAACAACGCTGTTAGTGCCAATCATGGAGCTGAAGTAGCTGAAGTTATCGATGAGGACTCCGACTTTTTCCTGCGTGAGTCTTCGGATTCTGGGCTGTTGGAAGAGATAGTTCATAAGTTCTTGCCAAAATCGAAGCCTAAAGTGGAGACTTCGACTGTGGCTCAGTCTTTTCCCGAGTCGGTTCCTCAACCGATATTTGATCATGTGGTTGTTTCTGCTAGCAAGGGTTATGCTGATTCCAGAATGAGGGTTCCCAAGGTTGACGGTTTTGGTGTCTGTTATGATTCTCCCATGCAGCAATTTGAAGCTCTTAGTGGTTTTAATGCCATGCAGGGTATGAGCTCTATCCAGAGAGATAACCAGTTTATGATGAATCATATTGCAGGATTCTCCGGCATTGAAGATTATCTTCAGTATCCTGAGCTTTTTAATTCCTTTGCGACCAGGATGTAA 1095 0.5068 MEEALRRLNGVTPSQEPDLVSDPHPKKCAAKRTLRDTANSGTAMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGVKARTNFVYPDAADPHLFHPFNLPKHCHVSRFPHNTNLGSDFPASSHHSASSSSSSLNMLLFRDFLNSSSNPCLLSSAPSQQFHNNKSASCYVNSSSPSLSSSTATNCLQGCCVGNANSYNNAVSANHGAEVAEVIDEDSDFFLRESSDSGLLEEIVHKFLPKSKPKVETSTVAQSFPESVPQPIFDHVVVSASKGYADSRMRVPKVDGFGVCYDSPMQQFEALSGFNAMQGMSSIQRDNQFMMNHIAGFSGIEDYLQYPELFNSFATRM* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0668 364 Gene3D AP2/ERF domain 44 103 IPR036955 GO:0003700|GO:0006355
Pvu3g0668 364 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 363 - -
Pvu3g0668 364 MobiDBLite consensus disorder prediction 1 41 - -
Pvu3g0668 364 Pfam AP2 domain 45 94 IPR001471 GO:0003700|GO:0006355
Pvu3g0668 364 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Pvu3g0668 364 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Pvu3g0668 364 SUPERFAMILY DNA-binding domain 45 102 IPR016177 GO:0003677
Pvu3g0668 364 CDD AP2 45 101 IPR001471 GO:0003700|GO:0006355
Pvu3g0668 364 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Pvu3g0668 364 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 1 363 - -
Pvu3g0668 364 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0668 Pvu-Chr3 9171392 9172486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0668 1 257 AP2-EREBP Transcription Factor Family AT1G24590 38.971 1.61e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu3g0668 AP2 6.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0668 - - gmx:102661952 432.95