Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0657 ATGGCTTCTTTCACTCCTCTGCTTGCATTTGTTTTCCCTTTGCTGACAACTTTTCCTACAGTTTTTGCCTTTGAGGTCTCAATCAAAGCTACTAATTTGTCTCCTTTATATTGCTCTGCTAAGATCACAACATGTAATGCCTCACTCTACCACACATCCCATAATCTCACCATTCACCAAATTTCCTCCTTTTACTCGGTTACTTCTTCCCATATCACACCCATAAAGCATGGCACCAAACAAGACTACCTCCTCAGAGTACCCTGTTCTTGCAAACATACAAGTGACCTTAGCGGATATTTCTATGACACCACCTACAAAGTAAGGCCACATGACACTTTTTCCAATATTTCAAACCTGGTTTTCAGTGGCCAAGCTTGGCCAGTTAATGGTACATTGCACCCAGATGAGAATTTAGCAATACACATTCCATGTGGGTGCTCAGAAAGTGACTCTCAAATAGTTGTCACCTATACAGTTCAGCCAAATGATACACCAACACTGATCGCGAATCTGCTAAATGCTTCACTGGCTGACATGCTGAGCATGAACAAGATTCTGGATCCGAACTTTAAATTCATAGATGTTGGTTGGGTGCTATTTGTTCCCAAAGGATCCAAAGGGCTATTACCTAGTACTGCTGCTGGCAATGAAGAAAAGAAACTTAAGTGGGCAACAACAATAATTGGTATCTTAGCGGGAGTGACATTCCTTTCAGTTATTACAACTATCATTCTCATTGTCAGAGTAAATAAAGAGAATCAAAAGAACAGTGAAGATTCACGCCTTATCTCTAGAAGATCAATTGCCAATAGAACTATTTCCTCAAAGTATAACTTTCAAAAAGAATATATAGAAGATGTTGTTTCATTAGAATCAGAAAGACCAATAGCATATAATCTTGAGGTGATTGAAGAGGCTACGAATAACTTTGATGAAAGTCGAAGAATAGGAAGTGGTGGATATGGAACTGTTTATTATGGAGTGTTAGGGAACAAGGAGGTGGCTGTGAAGAAAATGAGGTCCAATAAATCTAAAGAGTTCTATGCAGAACTCAAGGTCTTATGCAAGATCCACCATATCAACATTGTGGAGCTGTTGGGATATGCCAACGGAGAAGATGACCTCTATTTGGTGTATGAGTACGTTCCAAATGGATCTCTCAGTGATCATCTTCATGACCCATTACTGAAAGGGAACCAGCCTCTTTCTTGGAGTGTTAGGGTTCAAATTGCACTGGATGCTGCAAAAGGTCTTGAATATATACATGACTATACAAAAGCACGCTATGTGCACCGTGACATAAAGAGTAGCAACATTCTACTTAATGACAAGTTCAGAGCAAAGGTGGGAGATTTTGGACTTGCAAAGCTAGTAGATCGAACCGATGATGAAAATTTTATAGCAACCAGGCTTGTAGGAACACCAGGCTACCTTCCACCAGAATCTCTGAAGGAACTTCAAGTGACCCCAAAAACCGATGTGTTTGCGTTTGGAGTGGTGCTTTCAGAGCTGTTAACAGGGAAACGAGCATTATTTCGAGAAAGCCAAGAAGAGATTAAAATGAAATCACTCATCAGTGTTGTTAATAAAATATTCCAAGATGATGACCCAGAGATTGCCTTAGAAGATGCCATAGATAAGAATCTTGAAGCAAGCTATCGGATGGAAGATGTCTACAAGATGGCAGAAATAGCTGAGTGGTGCTTGCAAGAAGATCCAATAGAAAGGCCTGAAATGAGGGATATAATTGGGGCACTGTCACAGATTGTGATGTCCTCAACAGAGTGGGAAGCATCCCTATGTGGAAATAGCCAGGTCTTCAGCGGGCTGTACAGTGGAAGATGA 1848 0.4058 MASFTPLLAFVFPLLTTFPTVFAFEVSIKATNLSPLYCSAKITTCNASLYHTSHNLTIHQISSFYSVTSSHITPIKHGTKQDYLLRVPCSCKHTSDLSGYFYDTTYKVRPHDTFSNISNLVFSGQAWPVNGTLHPDENLAIHIPCGCSESDSQIVVTYTVQPNDTPTLIANLLNASLADMLSMNKILDPNFKFIDVGWVLFVPKGSKGLLPSTAAGNEEKKLKWATTIIGILAGVTFLSVITTIILIVRVNKENQKNSEDSRLISRRSIANRTISSKYNFQKEYIEDVVSLESERPIAYNLEVIEEATNNFDESRRIGSGGYGTVYYGVLGNKEVAVKKMRSNKSKEFYAELKVLCKIHHINIVELLGYANGEDDLYLVYEYVPNGSLSDHLHDPLLKGNQPLSWSVRVQIALDAAKGLEYIHDYTKARYVHRDIKSSNILLNDKFRAKVGDFGLAKLVDRTDDENFIATRLVGTPGYLPPESLKELQVTPKTDVFAFGVVLSELLTGKRALFRESQEEIKMKSLISVVNKIFQDDDPEIALEDAIDKNLEASYRMEDVYKMAEIAEWCLQEDPIERPEMRDIIGALSQIVMSSTEWEASLCGNSQVFSGLYSGR* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0657 615 SUPERFAMILY Protein kinase-like (PK-like) 295 587 IPR011009 -
Pvu3g0657 615 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 20 615 - -
Pvu3g0657 615 ProSiteProfiles Protein kinase domain profile. 311 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0657 615 Pfam LysM domain 158 203 IPR018392 -
Pvu3g0657 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Pvu3g0657 615 SMART LysM_2 157 203 IPR018392 -
Pvu3g0657 615 Gene3D Transferase(Phosphotransferase) domain 1 383 605 - -
Pvu3g0657 615 Gene3D LysM domain 149 208 IPR036779 -
Pvu3g0657 615 ProSiteProfiles LysM domain profile. 156 202 IPR018392 -
Pvu3g0657 615 Pfam Protein kinase domain 312 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0657 615 Gene3D Phosphorylase Kinase; domain 1 289 382 - -
Pvu3g0657 615 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Pvu3g0657 615 SMART serkin_6 311 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0657 615 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 20 615 IPR044812 GO:0019199|GO:0045087
Pvu3g0657 615 SUPERFAMILY LysM domain 156 203 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0657 Pvu-Chr3 8836569 8841201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0657 291 615 Receptor kinase-like Gene Family AT1G51940 51.057 1.06e-111 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pvu3g0657 Pkinase 3.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0657 - - gmx:100791718 1016.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0657 3 8836569 8841201 Pvu2g0616 2 6416917 6421698 PCT