Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0646 ATGATTCCTTCTTCTGTTTCCTTCCTGCTCCTCTTCCTTTCCGTGTTCGCACCTTTAACTCTTTCCGATCCAAGAGCGCAGAGAGCCGCTCTGCTATGCACCAACCGCTCAGTTTCGTCCCTTTCACGGCGCCAAGTTTTCATCTCAAACTTTCTGGAAGCGATGGACGCCTTGACCCCTCTGACGACGACTCGGCAGCGCGGCGCCGTGGTGAAGGGGTCAGGAAACGTCACCGTTTACGCCATGGGTGAGTGCATGAAGGACCTCTCGCAGTCGGACTGCAATGTGTGCCTGGCGCAGTGCAAGACGCAGCTCCTCGCGTGCCTCCCGTTCCAGAAAGGAACACAGGGTGGTAGGTTGTTCTTCGACGGCTGCTACCTCCGCTACGACGACTATAACTTCTTCGCCGAGAGCTTCGGCGACCAAGACACCACTGTGTGCGGCACCAATGTAAGTAGTAAAAATAGTAATAATATTAGTGATGGTGCTCACAGTAGCGGTATTTATAAGGCCAACGCTTTGGAGTTGGTTAGGAACCTGAGCGAGGTGGCGCCCAAAAACGATGGGTTTTGGGTGGGGTCGGTGGAGAAAAAGAACGTGAGTGTTTATGGGTTGGCTCAGTGCTGGGAGTTTGTGAACGGTAGTGCCTGCAAGAAATGTTTGGCGGATGCTGCTACGAGGATTGCTTCGTGTGCAACACAAGAAGGAAGGGCGTTGAATGCTGGTTGTTATTTGAGGTTCTCTGCGCACAAGTTTTATAACAATTCAACGGATGTTGCAATTTCTGGAAATCATGGACAACGGAGTCTAGCTAAAATTCTGGCTGCGACCACTGCTGCCCTGGCTCTTCTGCTGGTTGTTGCTACAGTTGTTTTCTTTATAAGGAAGAACATGGTGACAAGGAGAAGAGAAAGAAGACAGTTTGGTGCTCTTCTTGACCAAGTGAACAAGTCCAGGCTAAATATATCATATGAGATTCTTGAAAAGGCAACAGATTACTTCAATGATTCCAACAAGCTAGGACAAGGGGGGTCAGGTTCTGTTTATAAAGGAGTTATGCCAGATGGAATTACTGTTGCCATAAAAAGACTAAGATTTAACACAACACAATGGGTGGATCATTTCTTCAATGAGGTCAATTTGATAAGTGACATCCAACACAAAAATCTGGTAAAACTATTAGGATGCAGTATTACAGGACCTGAAAGCCTTCTTGTTTATGAATATGTGCCTAACCAGAGCCTCTATGATCACCTTTCTGTCAGAAGGATCTCTCAACCGCTGAGTTGGGAATTCAGGCATAAGATTATCTTAGGAATTGCAGAGGGCTTGGCCTACCTTCACGAGGAATCACATCTGCGAATCATTCATAGAGACATAAAATTGAGCAATATTCTACTTGAGGAGGACTTCACACCAAAGATTGCAGATTTTGGACTTGCTAGATTATTTCCAGAAGATAGGTCTCACATTAGCACAGTCATTGCTGGTACTCTGGGGTATATGGCTCCAGAGTATGTCATTCGTGGGAAGTTGTCTGAGAAAGCAGATGTTTACAGTTTTGGAGTTCTGGTTATCGAAATTGTATCTGGCAAAAGAAACAGTTCCTTTATTATGAATTCATCCTCTCTCCTACAAACGGTTTGGAGACTGTATGGATCAAATAGGCTATCTGAAATTGTTGATCCGACCCTAGAGTGTCCTTTTCCTGCAGAGGAAGCATGCCAACTACTTCAGATAGGGCTGCTTTGTGCACAAGCTACTGCAGAGTTGAGACCATCAATGTCAGTAGTAGTTAAAATGGTTAATCACAATCATGAAATTCCTCAGCCAACCCAACCGCCATTTATTAATTCTGGTAGTTCAGAACTCAGCAGATCTGGTTTACCTGGACATAATTTTCAGCCTGAATCCAACACTCAGTCTTCAGCAAACACCATGACTGAAAGTCAGATTGAACCTAGATGA 1968 0.4543 MIPSSVSFLLLFLSVFAPLTLSDPRAQRAALLCTNRSVSSLSRRQVFISNFLEAMDALTPLTTTRQRGAVVKGSGNVTVYAMGECMKDLSQSDCNVCLAQCKTQLLACLPFQKGTQGGRLFFDGCYLRYDDYNFFAESFGDQDTTVCGTNVSSKNSNNISDGAHSSGIYKANALELVRNLSEVAPKNDGFWVGSVEKKNVSVYGLAQCWEFVNGSACKKCLADAATRIASCATQEGRALNAGCYLRFSAHKFYNNSTDVAISGNHGQRSLAKILAATTAALALLLVVATVVFFIRKNMVTRRRERRQFGALLDQVNKSRLNISYEILEKATDYFNDSNKLGQGGSGSVYKGVMPDGITVAIKRLRFNTTQWVDHFFNEVNLISDIQHKNLVKLLGCSITGPESLLVYEYVPNQSLYDHLSVRRISQPLSWEFRHKIILGIAEGLAYLHEESHLRIIHRDIKLSNILLEEDFTPKIADFGLARLFPEDRSHISTVIAGTLGYMAPEYVIRGKLSEKADVYSFGVLVIEIVSGKRNSSFIMNSSSLLQTVWRLYGSNRLSEIVDPTLECPFPAEEACQLLQIGLLCAQATAELRPSMSVVVKMVNHNHEIPQPTQPPFINSGSSELSRSGLPGHNFQPESNTQSSANTMTESQIEPR* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0646 655 Gene3D - 149 252 IPR038408 -
Pvu3g0646 655 Gene3D - 28 134 IPR038408 -
Pvu3g0646 655 ProSiteProfiles Gnk2-homologous domain profile. 150 252 IPR002902 -
Pvu3g0646 655 CDD STKc_IRAK 340 603 - -
Pvu3g0646 655 Gene3D Transferase(Phosphotransferase) domain 1 410 613 - -
Pvu3g0646 655 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Pvu3g0646 655 Pfam Salt stress response/antifungal 164 249 IPR002902 -
Pvu3g0646 655 Pfam Salt stress response/antifungal 33 132 IPR002902 -
Pvu3g0646 655 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 17 644 - -
Pvu3g0646 655 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 17 644 - -
Pvu3g0646 655 ProSiteProfiles Gnk2-homologous domain profile. 26 134 IPR002902 -
Pvu3g0646 655 MobiDBLite consensus disorder prediction 608 655 - -
Pvu3g0646 655 Pfam Protein kinase domain 335 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0646 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Pvu3g0646 655 ProSiteProfiles Protein kinase domain profile. 334 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0646 655 SUPERFAMILY Protein kinase-like (PK-like) 318 622 IPR011009 -
Pvu3g0646 655 SMART serkin_6 334 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0646 655 Gene3D Phosphorylase Kinase; domain 1 294 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0646 Pvu-Chr3 8605888 8609962 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0646 20 499 Receptor kinase-like Gene Family AT1G70530 58.921 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu3g0646 Pkinase 5.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0646 - - gmx:100787359 1055.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0658 2 7144651 7147933 Pvu3g0646 3 8605888 8609962 PCT