Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0645 ATGGAAAGAACAGCCCCTGTGGTGTATTTCCAATGCTTTATTTTCCTTCTCATGAAAGCTGTATTGCTATCAAAAACAGTGGTGGCAGAACCAAGGGCCAAGACTGTCAATATAACATGTAGCCAGAAGTTAGAGCACAACTACACTATCTTTGTTCCAAATTTTGTTGCAACCATGGAGAAGATTAGTGAACAGATGAGCTCCACTGGTTATGGCACAGCAGTTGAAGGGACAGGAGGACCTGACACTAACTACGGGTTGGCTCAGTGCTATGGTGATCTCTCACCACTTGACTGTGTTTTATGTTATGCCGAGGCACGCACGGTTCTTCCCCAATGCTTCCCTCACAACGGTGGTCGCATATACCTTGATGGTTGCTTCATGAGGGCGGAAAACTACAGCTTCTATGATGAGTACACAGGGCCAGGAGACAAGGCTGTTTGTGGAAACACAACAAAGAAGAACACAAGTTTTCAAGCAGCAGCAAAGAAGGCTGTTATGACTGCAGTTCAAACTGCACCAAACAATAAAGGGTATGCTAGAGCTGAGGTTGCAGTAGAAGGAACAGCAAATGACTCAGCTTATGTTCTGGCTAATTGTTGGAGGAGCTTGGACGCAAAGTCTTGTAGAGCTTGTCTTGAGAATGCATCTTCTTCCGTATTGGGGTGCCTGCCCTGGTCAGGAGGGCGAGCCCTCAACACTGGATGCTTCATGAGGTACTCAGACTCTGATTTTCTTAACAAGGAAGAGAAAAAGGGAAGGTCAGGAGATAATGTATTAGTGATAGTGATTACAGTAGTCAGTTCAGCTATTGTTTTGGTGGTTGGAATAGCTATTGTGGTTTACATCCGCAAACACAGATATGTTCAAATGAAACGAAGAGGTTCAAATGATGCAGAAAAGTTAGCCAAAAGCCTTCACCACAATAGCTTGAACTTCAAATACTCTACACTGGAGAAGGCTACTAATTCTTTTGATGAAGATAACAAGCTTGGTCAAGGAGGATTTGGAGCGGTTTATAAAGGAGTTCTGCCTGATGGAAGAGAGATTGCTATTAAGAGATTATATTTCAACAACAGGCATAGAGCAGCGGATTTCTACAATGAAGTCAACATAATTAGTAGTGTGGAACACAAAAATCTAGTCAGACTCTTAGGATGCAGTTGTTCAGGACCAGAAAGCCTGCTTATATACGAGTTTCTAGCTAACAGAAGTCTTGATCGCTTCATATTTGATAAAAACAAGGGTAGAGAACTAAATTGGACCAAGAGATATGACATTATCGTGGGGACAGCTGAAGGATTGGTTTACCTGCATGAGAACTCCAACATCAGGATAATCCACAGAGATATAAAAGCCAGCAACATCTTATTAGATGCAAAGCTTCGTGCTAAAATTGCTGATTTTGGTTTGGCCAGGTCCTTTCAAGATGATAAGAGCCACATTACTACAGCTATTGCTGGAACTTTGGGTTATATGGCTCCAGAGTACCTAGCACATGGTCAGTTAACAGAGAAAGCAGACGTATATAGCTTTGGGGTGTTACTGTTAGAAATAATTACTGGGAGACAGAATAACAGGAGCAAAGCATCAGAATATTCAGACAGCCTAATAATAATGACATGGAAGCATTTTCAATCAGGGACTGCGGAACAAATAATTGATCCATATCTATTGTTGGATGACAACCATAGAAGCAAAGTTAAGAATGATATTTTAAGAGTGGTGCAGATAGGACTTCTATGCACCCAAGAAATCTCTTCCTTGCGACCATCTATGTCAAAGGCACTAAAGATGCTAACAAAGAAGGAGGAGCATGTGGAAGCACCCTCCAATCCACCCTTTATAGATGAAAGTACCATGGAACTCCATGACCAAAATGATGGTCCATTTTATCCTCTCAATGCAGCAGACTCATTGGCTACTATGTCCCATAGCTCATTTTATCCAAGGTAA 1956 0.4187 MERTAPVVYFQCFIFLLMKAVLLSKTVVAEPRAKTVNITCSQKLEHNYTIFVPNFVATMEKISEQMSSTGYGTAVEGTGGPDTNYGLAQCYGDLSPLDCVLCYAEARTVLPQCFPHNGGRIYLDGCFMRAENYSFYDEYTGPGDKAVCGNTTKKNTSFQAAAKKAVMTAVQTAPNNKGYARAEVAVEGTANDSAYVLANCWRSLDAKSCRACLENASSSVLGCLPWSGGRALNTGCFMRYSDSDFLNKEEKKGRSGDNVLVIVITVVSSAIVLVVGIAIVVYIRKHRYVQMKRRGSNDAEKLAKSLHHNSLNFKYSTLEKATNSFDEDNKLGQGGFGAVYKGVLPDGREIAIKRLYFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLIYEFLANRSLDRFIFDKNKGRELNWTKRYDIIVGTAEGLVYLHENSNIRIIHRDIKASNILLDAKLRAKIADFGLARSFQDDKSHITTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIITGRQNNRSKASEYSDSLIIMTWKHFQSGTAEQIIDPYLLLDDNHRSKVKNDILRVVQIGLLCTQEISSLRPSMSKALKMLTKKEEHVEAPSNPPFIDESTMELHDQNDGPFYPLNAADSLATMSHSSFYPR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0645 651 SMART serkin_6 325 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0645 651 Gene3D Phosphorylase Kinase; domain 1 285 400 - -
Pvu3g0645 651 Gene3D Transferase(Phosphotransferase) domain 1 401 612 - -
Pvu3g0645 651 ProSiteProfiles Protein kinase domain profile. 325 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0645 651 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 11 632 - -
Pvu3g0645 651 Gene3D - 32 135 IPR038408 -
Pvu3g0645 651 Gene3D - 145 245 IPR038408 -
Pvu3g0645 651 ProSiteProfiles Gnk2-homologous domain profile. 33 135 IPR002902 -
Pvu3g0645 651 SUPERFAMILY Protein kinase-like (PK-like) 307 602 IPR011009 -
Pvu3g0645 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Pvu3g0645 651 ProSiteProfiles Gnk2-homologous domain profile. 140 245 IPR002902 -
Pvu3g0645 651 CDD STKc_IRAK 331 602 - -
Pvu3g0645 651 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Pvu3g0645 651 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 11 632 - -
Pvu3g0645 651 Pfam Protein tyrosine and serine/threonine kinase 328 545 IPR001245 GO:0004672|GO:0006468
Pvu3g0645 651 Pfam Salt stress response/antifungal 49 133 IPR002902 -
Pvu3g0645 651 Pfam Salt stress response/antifungal 148 242 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0645 Pvu-Chr3 8584907 8588683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0645 8 651 Receptor kinase-like Gene Family AT1G70520 66.873 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu3g0645 PK_Tyr_Ser-Thr 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0645 - - ccaj:109816764 1144.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0659 2 7153010 7158204 Pvu3g0645 3 8584907 8588683 PCT
Pvu3g0645 3 8584907 8588683 Pvu2g0662 2 7203777 7207149 PCT