Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0637 ATGGAAAAAGGGAGAGAGAAATTATCACTTTCAGCTATAAATTCTTACTTGTGTACAATGAGCTACATCTTCAATCTCTCTCTCCCTCTCTCTCTCCCTCTCTCTTTCTCATACACTTCAAACACCTGTAGCACAGCCATGTCAACACTGAACCATCTTTTCGATCTTCCAGAACAGATATGTTACGTAGAATGTGGATTCTGTACCACAACATTAATGGTAAGCGTCCCATGCAGCAGTTTCTCAATGGTGGTGACAGTCAGATGCGGCCACTGCACAAGCCTTCTCTCTGTTAATATGAAGAAAACTTCCTTTGTCCCTTTCCACCTTCTTGCTTCTCTTACTCATCTTGAGCCAAGCAAAGGTAGTTCAGAAGATGGTGCAAACAAGACTTTGAAAAGCTATAATGCATCCAGAATGAACTATTCAGATTGTGAGGAACAGAACATGCCTCAACTTTCCAATGTTGTGAACAAACCCCCAGAGAAGAGACAGAGAACACCATCTGCTTATAACCGCTTCATCAAAGAAGAGATTAAAAGGCTAAAGGCAGAAAACCCTAAAATGGCCCACAAAGAAGCTTTCAGCACTGCGGCGAAAAATTGGGCCAATTTCCCCCCTTCTCAGTGCAAAGGAGAAGCAGACAGCTGTAAACTTGTGGATCTAGATTGCCATGTAGAGTCTTTCAATGCTCCTGAGGTAAATATCATATAA 714 0.4202 MEKGREKLSLSAINSYLCTMSYIFNLSLPLSLPLSFSYTSNTCSTAMSTLNHLFDLPEQICYVECGFCTTTLMVSVPCSSFSMVVTVRCGHCTSLLSVNMKKTSFVPFHLLASLTHLEPSKGSSEDGANKTLKSYNASRMNYSDCEEQNMPQLSNVVNKPPEKRQRTPSAYNRFIKEEIKRLKAENPKMAHKEAFSTAAKNWANFPPSQCKGEADSCKLVDLDCHVESFNAPEVNII* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0637 237 Gene3D High mobility group box domain 153 213 IPR036910 -
Pvu3g0637 237 PANTHER AXIAL REGULATOR YABBY 4 47 219 - -
Pvu3g0637 237 Pfam YABBY protein 57 208 IPR006780 GO:0007275
Pvu3g0637 237 SUPERFAMILY HMG-box 153 209 IPR036910 -
Pvu3g0637 237 PANTHER PROTEIN YABBY 6-RELATED 47 219 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0637 Pvu-Chr3 8393693 8395131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0637 48 217 C2C2-YABBY Transcription Factor Family AT1G23420 61.326 5.01e-65 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pvu3g0637 YABBY 8.5e-62 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0637 K25796 - gmx:100807136 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0637 3 8393693 8395131 Pvu3g0637 3 8393693 8395131 ECH
Pvu2g0722 2 9554540 9556683 Pvu3g0637 3 8393693 8395131 PCT