Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu3g0625 | ATGCTGTCATATATACTGCCATCGCGAAATGATAATTCCTCCCCATCACCACGTAAAAATTCGCCACCACCATCACCACAGTTCCATGCTCCACCTCCCCTTGATAACCCTTCTACGAATAGTTTGCGTGATGCAGTCTCCAATGACTCAACAACGGGAAGCTCTTGGAACTCACAAGCAACAGGATCAAGCCCCCAGGTCAAGCGTGGCGTTATTTCCCAAGAAAACTCAACGGTTTCTCCTCCCGCGCCCGGTGATAATTCAGAAAAACATGCTGCCTATGCAGTCGCCGGACTTTTAGCTTTTGCCTTCGTTGCTGTAGCAGTAGCTGTAGCCTTTGCTTTGGTGTTTAAGAGGAAGAAACCAAGAGATGATGCTAATGGTGCACCCTACATGCCACCCCTTGATATTCAAGTCAAATCAGGTGCTAATGGGCATTACTATGAACAGCAGCCTTCCCTTGTAAACACCATTGGAAATGGGAATGCGAACGTGAAGCATTTTGGATCTCCTTTAAACTCACCCCAGCTCAAAAGTGCTCCGATAATTTTTACCTATGAAATGGTTATGGAAATAACAAACTCATTTTCTAGTCAAAATGTTATAGGAGAAGGAGGATTTGGGTGTGTTTACAAAGGTTTGCTGCCAGATGGAACAGGAGTTGCAGTAAAACAGCTTAGGGCTGGCGGTGGGCAGGGAGAAAGGGAATTCAAGGCTGAAGTGGAGATCATTAGCCGAGTACATCATCGATATTTGGTGTCATTAGTTGGTTATTGCGTATCCGAACAGCAAAGAATCCTTATCTATGAGTATGTTCCTAATGGAACACTCCATCATCACTTGCATGGAAGGGGAATGCCAGTGTTGGATTGGTTCAAAAGGCTAAAGATTGCAATAGGCGCTGCAAAGGGCCTGGCATATCTTCATGAGGACTGCAGCCAAAAGATAATTCACCGAGATATTAAGTCAGCAAACATACTCTTGGATGATGCTTTTGAGGCAAAGGTTGCAGACTTTGGGCTTGCTAGGCTATCTGATGCTGCCAATACCCATGTATCAACTAGGGTTATGGGGACCTTTGGGTACATGGCTCCAGAATATGCAACAAGTGGAAAATTAACGGACAGATCAGATGTTTACTCATTTGGGGTTGTCCTTCTTGAGCTTGTTACGGGAAGGAAACCCGTTGATCAAACTCAGCCAATTGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCATTCGTGCAATGGAGACACGTAATTTTAGTGAACTGGTAGATCCAAGACTCGAAAACCAGTTTGTGGAGAGTGAAATGTCCAGAATGGTTGAGGCAGCTGCAGCTTGTGTTCGCCACTCAGCTCCTAAACGGCCTCGTATGGTTCAGGTGGTAAGAGCCTTGGATACTGTTGATGAAAGTTCTGATCTATCTAACGGGGTGAAATATGGTCAGAGCACAAATTATGATTCTGGCCAGTATGATAAAGAAATAATGCTATTCAAAAGGTTGGCAAATGGCACCTTTGTTGATTCTGATTTTGATAGTAGAGAATACAGTCTTTCAAGACAGACCTCGAGAGGATCCCAACAAGAATTGATTCGGTATAGTTCTAGTGGCGAGTCAGAACCTAGAACATAG | 1644 | 0.4453 | MLSYILPSRNDNSSPSPRKNSPPPSPQFHAPPPLDNPSTNSLRDAVSNDSTTGSSWNSQATGSSPQVKRGVISQENSTVSPPAPGDNSEKHAAYAVAGLLAFAFVAVAVAVAFALVFKRKKPRDDANGAPYMPPLDIQVKSGANGHYYEQQPSLVNTIGNGNANVKHFGSPLNSPQLKSAPIIFTYEMVMEITNSFSSQNVIGEGGFGCVYKGLLPDGTGVAVKQLRAGGGQGEREFKAEVEIISRVHHRYLVSLVGYCVSEQQRILIYEYVPNGTLHHHLHGRGMPVLDWFKRLKIAIGAAKGLAYLHEDCSQKIIHRDIKSANILLDDAFEAKVADFGLARLSDAANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVYSFGVVLLELVTGRKPVDQTQPIGDESLVEWARPLLIRAMETRNFSELVDPRLENQFVESEMSRMVEAAAACVRHSAPKRPRMVQVVRALDTVDESSDLSNGVKYGQSTNYDSGQYDKEIMLFKRLANGTFVDSDFDSREYSLSRQTSRGSQQELIRYSSSGESEPRT* | 548 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu3g0625 | 547 | MobiDBLite | consensus disorder prediction | 34 | 84 | - | - | |
Pvu3g0625 | 547 | CDD | STKc_IRAK | 202 | 470 | - | - | |
Pvu3g0625 | 547 | MobiDBLite | consensus disorder prediction | 17 | 33 | - | - | |
Pvu3g0625 | 547 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED | 14 | 533 | - | - | |
Pvu3g0625 | 547 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 14 | 533 | - | - | |
Pvu3g0625 | 547 | ProSiteProfiles | Protein kinase domain profile. | 196 | 472 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu3g0625 | 547 | Gene3D | Transferase(Phosphotransferase) domain 1 | 272 | 491 | - | - | |
Pvu3g0625 | 547 | ProSitePatterns | Protein kinases ATP-binding region signature. | 202 | 224 | IPR017441 | GO:0005524 | |
Pvu3g0625 | 547 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 316 | 328 | IPR008271 | GO:0004672|GO:0006468 | |
Pvu3g0625 | 547 | SMART | serkin_6 | 196 | 472 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu3g0625 | 547 | MobiDBLite | consensus disorder prediction | 521 | 547 | - | - | |
Pvu3g0625 | 547 | Pfam | Protein tyrosine and serine/threonine kinase | 199 | 469 | IPR001245 | GO:0004672|GO:0006468 | |
Pvu3g0625 | 547 | MobiDBLite | consensus disorder prediction | 1 | 89 | - | - | |
Pvu3g0625 | 547 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Pvu3g0625 | 547 | Gene3D | Phosphorylase Kinase; domain 1 | 162 | 271 | - | - | |
Pvu3g0625 | 547 | SUPERFAMILY | Protein kinase-like (PK-like) | 171 | 469 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu3g0625 | Pvu-Chr3 | 8181117 | 8185987 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu3g0625 | 69 | 536 | Trihelix Transcription Factor Family | AT1G70460 | 59.063 | 0.0 | 557 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_PERK-1 | Pvu3g0625 | PK_Tyr_Ser-Thr | 1.3e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu3g0625 | - | - | pvu:PHAVU_003G060600g | 1021.92 |