Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0625 ATGCTGTCATATATACTGCCATCGCGAAATGATAATTCCTCCCCATCACCACGTAAAAATTCGCCACCACCATCACCACAGTTCCATGCTCCACCTCCCCTTGATAACCCTTCTACGAATAGTTTGCGTGATGCAGTCTCCAATGACTCAACAACGGGAAGCTCTTGGAACTCACAAGCAACAGGATCAAGCCCCCAGGTCAAGCGTGGCGTTATTTCCCAAGAAAACTCAACGGTTTCTCCTCCCGCGCCCGGTGATAATTCAGAAAAACATGCTGCCTATGCAGTCGCCGGACTTTTAGCTTTTGCCTTCGTTGCTGTAGCAGTAGCTGTAGCCTTTGCTTTGGTGTTTAAGAGGAAGAAACCAAGAGATGATGCTAATGGTGCACCCTACATGCCACCCCTTGATATTCAAGTCAAATCAGGTGCTAATGGGCATTACTATGAACAGCAGCCTTCCCTTGTAAACACCATTGGAAATGGGAATGCGAACGTGAAGCATTTTGGATCTCCTTTAAACTCACCCCAGCTCAAAAGTGCTCCGATAATTTTTACCTATGAAATGGTTATGGAAATAACAAACTCATTTTCTAGTCAAAATGTTATAGGAGAAGGAGGATTTGGGTGTGTTTACAAAGGTTTGCTGCCAGATGGAACAGGAGTTGCAGTAAAACAGCTTAGGGCTGGCGGTGGGCAGGGAGAAAGGGAATTCAAGGCTGAAGTGGAGATCATTAGCCGAGTACATCATCGATATTTGGTGTCATTAGTTGGTTATTGCGTATCCGAACAGCAAAGAATCCTTATCTATGAGTATGTTCCTAATGGAACACTCCATCATCACTTGCATGGAAGGGGAATGCCAGTGTTGGATTGGTTCAAAAGGCTAAAGATTGCAATAGGCGCTGCAAAGGGCCTGGCATATCTTCATGAGGACTGCAGCCAAAAGATAATTCACCGAGATATTAAGTCAGCAAACATACTCTTGGATGATGCTTTTGAGGCAAAGGTTGCAGACTTTGGGCTTGCTAGGCTATCTGATGCTGCCAATACCCATGTATCAACTAGGGTTATGGGGACCTTTGGGTACATGGCTCCAGAATATGCAACAAGTGGAAAATTAACGGACAGATCAGATGTTTACTCATTTGGGGTTGTCCTTCTTGAGCTTGTTACGGGAAGGAAACCCGTTGATCAAACTCAGCCAATTGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCATTCGTGCAATGGAGACACGTAATTTTAGTGAACTGGTAGATCCAAGACTCGAAAACCAGTTTGTGGAGAGTGAAATGTCCAGAATGGTTGAGGCAGCTGCAGCTTGTGTTCGCCACTCAGCTCCTAAACGGCCTCGTATGGTTCAGGTGGTAAGAGCCTTGGATACTGTTGATGAAAGTTCTGATCTATCTAACGGGGTGAAATATGGTCAGAGCACAAATTATGATTCTGGCCAGTATGATAAAGAAATAATGCTATTCAAAAGGTTGGCAAATGGCACCTTTGTTGATTCTGATTTTGATAGTAGAGAATACAGTCTTTCAAGACAGACCTCGAGAGGATCCCAACAAGAATTGATTCGGTATAGTTCTAGTGGCGAGTCAGAACCTAGAACATAG 1644 0.4453 MLSYILPSRNDNSSPSPRKNSPPPSPQFHAPPPLDNPSTNSLRDAVSNDSTTGSSWNSQATGSSPQVKRGVISQENSTVSPPAPGDNSEKHAAYAVAGLLAFAFVAVAVAVAFALVFKRKKPRDDANGAPYMPPLDIQVKSGANGHYYEQQPSLVNTIGNGNANVKHFGSPLNSPQLKSAPIIFTYEMVMEITNSFSSQNVIGEGGFGCVYKGLLPDGTGVAVKQLRAGGGQGEREFKAEVEIISRVHHRYLVSLVGYCVSEQQRILIYEYVPNGTLHHHLHGRGMPVLDWFKRLKIAIGAAKGLAYLHEDCSQKIIHRDIKSANILLDDAFEAKVADFGLARLSDAANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVYSFGVVLLELVTGRKPVDQTQPIGDESLVEWARPLLIRAMETRNFSELVDPRLENQFVESEMSRMVEAAAACVRHSAPKRPRMVQVVRALDTVDESSDLSNGVKYGQSTNYDSGQYDKEIMLFKRLANGTFVDSDFDSREYSLSRQTSRGSQQELIRYSSSGESEPRT* 548
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0625 547 MobiDBLite consensus disorder prediction 34 84 - -
Pvu3g0625 547 CDD STKc_IRAK 202 470 - -
Pvu3g0625 547 MobiDBLite consensus disorder prediction 17 33 - -
Pvu3g0625 547 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 14 533 - -
Pvu3g0625 547 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 533 - -
Pvu3g0625 547 ProSiteProfiles Protein kinase domain profile. 196 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0625 547 Gene3D Transferase(Phosphotransferase) domain 1 272 491 - -
Pvu3g0625 547 ProSitePatterns Protein kinases ATP-binding region signature. 202 224 IPR017441 GO:0005524
Pvu3g0625 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
Pvu3g0625 547 SMART serkin_6 196 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0625 547 MobiDBLite consensus disorder prediction 521 547 - -
Pvu3g0625 547 Pfam Protein tyrosine and serine/threonine kinase 199 469 IPR001245 GO:0004672|GO:0006468
Pvu3g0625 547 MobiDBLite consensus disorder prediction 1 89 - -
Pvu3g0625 547 MobiDBLite consensus disorder prediction 1 16 - -
Pvu3g0625 547 Gene3D Phosphorylase Kinase; domain 1 162 271 - -
Pvu3g0625 547 SUPERFAMILY Protein kinase-like (PK-like) 171 469 IPR011009 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu3g0625 Pvu-Chr3 8181117 8185987 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0625 69 536 Trihelix Transcription Factor Family AT1G70460 59.063 0.0 557
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pvu3g0625 PK_Tyr_Ser-Thr 1.3e-48 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0625 - - pvu:PHAVU_003G060600g 1021.92