Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0614 ATGGAAGGAGGAGGAGCTGCTCCACCGGCAGACACAGTCATGTCCGACGCGGTGCCGCATCCAGACCCCCATCAGCCGCCCGCGGCCATGGGGATCGAGAATATTCCGGCCACTCTCAGCCACGGTGGCAGGTTCATCCAATACAACATATTTGGCAACATATTCGAAGTCACCGCCAAATACAAGCCACCCATCATGCCCATAGGAAAAGGCGCATACGGCATCGTTTGCTCGGCTTTGAACTCGGAGACGAAAGAGCATGTTGCCATCAAGAAGATTGCAAATGCTTTTGACAACAAGATTGATGCCAAGAGGACCCTTCGAGAAATCAAGCTGCTTCGTCACATGGATCATGAAAACGTGGTTGCAATCAGGGATATAGTGCCACCACCTCAAAGGGAGGTGTTCAATGATGTTTACATTGCTTATGAATTGATGGATACTGACCTTCACCAAATCATTCGTTCAAATCAAGCATTATCAGAGGAGCATTGTCAGTATTTTCTGTATCAAATTCTCCGCGGGTTGAAGTATATACATTCTGCAAATGTTCTGCACAGGGACTTAAAGCCTAGCAACCTTCTCCTGAATGCCAACTGTGACTTAAAAATTTGTGATTTTGGATTGGCTCGAGTCACCTCTGAAACTGATTTTATGACTGAATATGTTGTTACAAGATGGTACCGTGCACCAGAGCTTCTGTTGAACTCTTCTGATTACACAGCAGCAATTGATGTATGGTCTGTTGGTTGTATTTTCATGGAACTGATGGATCGAAAGCCTTTGTTTCCTGGCAGAGATCACGTGCATCAGTTGCGTCTGCTTATGGAGCTGATTGGCACCCCTTCAGAAGCTGATTTGGGGTTTCTGAATGAAAATGCTAAGAGATACATTAGGCAACTGCCTCTTTACCTCCGTCAATCTCTCCAAGAAAAGTTTCCACATGTCCACCCTGAAGCTATAGATCTTGTTGAAAAAATGTTAACTTTTGACCCTAGAAAAAGGATTACTGTTGAAGATGCCCTGGCACACCCGTACTTAACGTCTCTGCATGACATCAGTGATGAACCTGTATGCATGACTCCCTTTAGCTTTGACTTTGAACAACATGCTTTGACTGAGGAACAGATGAAAGAACTGATATACCGAGAGGCTTTAGCATTTAATCCTGAATATCAGCAGTAG 1185 0.4481 MEGGGAAPPADTVMSDAVPHPDPHQPPAAMGIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETKEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYLRQSLQEKFPHVHPEAIDLVEKMLTFDPRKRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNPEYQQ* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0614 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Pvu3g0614 394 SMART serkin_6 62 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0614 394 MobiDBLite consensus disorder prediction 1 27 - -
Pvu3g0614 394 CDD STKc_TEY_MAPK 55 390 - -
Pvu3g0614 394 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 392 - -
Pvu3g0614 394 SUPERFAMILY Protein kinase-like (PK-like) 67 355 IPR011009 -
Pvu3g0614 394 Gene3D Transferase(Phosphotransferase) domain 1 146 374 - -
Pvu3g0614 394 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 392 - -
Pvu3g0614 394 ProSiteProfiles Protein kinase domain profile. 62 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0614 394 ProSitePatterns Protein kinases ATP-binding region signature. 68 92 IPR017441 GO:0005524
Pvu3g0614 394 ProSitePatterns MAP kinase signature. 97 200 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pvu3g0614 394 Gene3D Phosphorylase Kinase; domain 1 45 384 - -
Pvu3g0614 394 Pfam Protein kinase domain 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0614 Pvu-Chr3 7997521 8002353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0614 1 394 MAP Kinase Gene Family AT2G43790 86.967 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pvu3g0614 Pkinase 2.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0614 K14512 - gmx:100805830 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0614 3 7997521 8002353 Pvu2g1556 2 29168464 29171622 PCT