Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0606 ATGAAGGAGATGGAGAAGAGGAAAAGTGAGAAGGAGGGGTGTGAGAAGAATGTGATGGTGTTACAGAAAAGTGTGAAGAAGCTACATTTTGGAAGGTGGGAAGAGAAAGAAGTTGCAGCAAAGGAGATTGAAAGGTTGGCTAAAGAAGATGAGAAGGTGAGAGAGTTGACAAGTGAGCTTGGGGTGGTCAGGGTGCTGGTTTCTATGGCGCTTTCCCCCGTCGCCACCCGCCGCCTCGTCGGACTCAAAGCATTGATCCAGCTATCCCATGGAAATCACAAGAATAAGGCTTTGATAGTGGAGGCAGGAATGTTGTGCAAACTGCCTAAGAAAAATGACCTTGATGATGAATCAATAAGTGAATTTGCAGAGTTGCTCTCTTCATTGTCATCTCTAGGAAACATCCAATTTCCTCATTCTAAATTGGGCTTTCTCCAATTTCTCGTAGACATTCTGAAGTCATGCCCAAGCTTTGATACAAAACAGTCGTGTTTGGTAGCCATGTCCAACATCTCAACTGTGTTAGAGCATGCGGGGCCTTTGATTTCTAACGGGGTTGTACCTATTCTCTTGGAACTGTCCTCAGAAAAAGGAAGTTCAGAGAAAGTACTTACCATCCTTGGGAACTTGGTGGTGACTTTAATGGGAAAGAAAGCATTGGAGAACAGCTCAATGGTGCCAAAATGCTTGATTGAGACCTTATCTTGGGAAGATGAACCCAAATGCCAAGAGTTGTCAGCTAAAATTTTGATTATTCTAGCTCATAAAAACTCAACACAGAGAAATAAAATGGTACAGTCAGGCATTATTCCTGTACTCCTTGAAGTAGCTTTATTAGGGAGTTCTTTAGCTCAGGAAAGAGCACGGAAATTGTTGCAATGGTTTAGGGATGGACGGCAAATAAAGATGGGGCCCCATTCAGGCTCACAATCTACAAGAATTGCAACTGAATCACTTAAAAATCAAAGAGATAGAGAAGAAGGGAAGAGAATGATGAAGAGTTTAGTGCAAGAAAGTCTGCATAGGAATATGGAAATAATAACTAGAAGAGCTAATATAGTTGAGGATTCTTCTAATGGGCTCAAGTCCTTGGTTACTAGCACAAGATCCAAGAGTTTGCCAAACTGA 1128 0.4202 MKEMEKRKSEKEGCEKNVMVLQKSVKKLHFGRWEEKEVAAKEIERLAKEDEKVRELTSELGVVRVLVSMALSPVATRRLVGLKALIQLSHGNHKNKALIVEAGMLCKLPKKNDLDDESISEFAELLSSLSSLGNIQFPHSKLGFLQFLVDILKSCPSFDTKQSCLVAMSNISTVLEHAGPLISNGVVPILLELSSEKGSSEKVLTILGNLVVTLMGKKALENSSMVPKCLIETLSWEDEPKCQELSAKILIILAHKNSTQRNKMVQSGIIPVLLEVALLGSSLAQERARKLLQWFRDGRQIKMGPHSGSQSTRIATESLKNQRDREEGKRMMKSLVQESLHRNMEIITRRANIVEDSSNGLKSLVTSTRSKSLPN* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0606 375 Coils Coil 39 59 - -
Pvu3g0606 375 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 11 374 - -
Pvu3g0606 375 SUPERFAMILY ARM repeat 25 288 IPR016024 -
Pvu3g0606 375 Gene3D - 140 220 IPR011989 -
Pvu3g0606 375 Gene3D - 221 293 IPR011989 -
Pvu3g0606 375 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 11 374 - -
Pvu3g0606 375 Gene3D - 18 139 IPR011989 -
Pvu3g0606 375 MobiDBLite consensus disorder prediction 302 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0606 Pvu-Chr3 7825889 7827678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0606 34 307 U-box Gene Family AT1G67530 28.114 3.54e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0606 - - var:108327871 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0606 3 7825889 7827678 Pvu3g0606 3 7825889 7827678 ECH