Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0592 ATGAATTTGCCATCAACTATTTGCCTCTCTTATTTACTCCTTTCCTTTCTTCTCATTACGTATTACCAAGTTGAGGCTACAGATGGAGAAAACCAAGTCATATCTATTGGTGTAATAATTGATGTCAACTCACGCATTGGGAAAGAACAGCGTGTAGCCATGGACCTTGCAGTTCAAACTTACAATACCACTTCCAACACCTACAAGCTTGCTCTTCATTTTCAGCAACCCATCAAAGATCCCTTCAGACCCACTTCCCTTGCTAGAAGAATGATTATGAGACAAAAGATGCAAGTGATTATAGGGATGCACACATGGGAAGAAGCAGCTTCAGTAGCTGAATTAGTACGCAAATCTCAAGTTCCTGTCATATCCTTTGCAGCTCCTAGCATTACCCCACCATTGATGCCAATTCGGTGGCCTTCCTTGGTAAGAATGGCGAACAATGGTACTGCGTATGCAAAATGTGTTGCAGATATGGTACATGCTTATAGTTGGCAGAGAGTAGTAGTCATTTATGAAGATGGAGATTATGAGATGCTAGCCTTGCTATCTGAGACCCTCCAAGATGTTGGTTCACTGATCGAGTACCGTTTGGCTCTTCCATCTCTTTCTTATCTTTCTAATCCTGCAGAGTTCATTCGCGAAGAGCTGTTTAAGGTGATTGAAAATACACAGTCCCGGGTGTTCATTGTTCTGCAATCATCATTGGAAATGGTGATTCATTTGTTCAGAGAAGCTTCACAAATGGGACTTGTGGATGGAGAATCAGCTTGGATAATCCCAGAGAGCATAACTAATTTGCTTGATTCTGTCAACAAGTCTGCTATTTCCTACATGGAAGGAGCTTTAGGAATCAAGACCTACTACTCTGAACTTAGCAGTGAATATCAAAATTTTGAGGTTCGGTTCAGGAAATCTTTTCGTGCCAAGTATCCTGAGGAGGACAACAGCAGCCCGGGATTTTATGCTCTGCAAGCACATGATAGCATTAAAATTGTTGCACAAGCAATAGATAGAATGGAGAGTGACAGAAACACTCTGCTAAGAGAAATACTTTCTAGCAATTTCGTTGGCTTAAGTGGAGAAATTCGATTTGAAGCAGCGCAGCTCTCTCAGAATTCTACCTTCAGGATTGTAAATGTAGATAGGAAGAGTTACAGAGAGTTGGACTTTTGGACTCCAGAAGGTGGGTTCATGAGTAGCCTTCCTACAGAACAAGGTTCAAATAGTGTTTCTAGAAACACCAAAAGTTTAAGTGACGTTGTAATATGGCCAAGGAAACTAACAACAATTCCAAAGGGATGGAATCTGCCTACTAAACAAAAACCAATGAAAATAGCGGTTCCTGGAAGAACCTCCTTTTCCAAGTTTGTCAAGGTTGATCGTGACGAGCTTACAAATAAATATAAATACACTGGATTCTGCATTGACATTTTTGAGAAGGTGTTACCCCTTTTGGGGTATGACCTGCCATATGACTTTCATCCCGTCAATGGAACCTATCCCGATCTGGTTCAACTGGTCTATAACAAGACTTACGATGCTGTTGTTGGCGACGTGACCATATTAGAAGAAAGATTGCAATATGTAGATTTTACGATGCCATATGCAGAGTCAGGGTTGTCAATGATAGTTACGGAAAAGTCTGAAGAATCGACATGGATGTTTATGAAGCCCTTCACCTGGCAAATGTGGGTGGCAACTGGTGCCGTGTTGATGTACACAATGGTAGTTGTTTGGTGCCTGGAGCGGAAACCCAATCCTGAGTTTCAAGGCAATTGGAAGAGCCAGATCAGCACTGCGCTTATGTTTACCTTCTCCTCTCTATTCTTTGCTCACAGGGAGAAAATTTATAATAACTTAACTCGAGTGGTGATGGTATCATGGCTGTTTCTAGTTTTGATTCTTAACTCAAGCTACACTGCTAGTCTTTCTTCCATGCTCACAGTTCAACGACTGCGACCAAATGTGACTGACATTGAGTGTCTGAAGAAGAACAACATGAAAATTGGTTGTGACGGTGACTCATTTGTTAGGACATACCTGGAGCAAGTCGAAGACTTCAAGCCAGAGAACATCCTACACATTAATAGTGAATATAGTTATGAAGATGCATTCAAAAACAACACAATAGCAGCTGCTTTTCTCGAAGTCCCCTATGAAAAAGTATATATCAGTAAATATTGCAAGGGATACTCTGCCTTTGTGCCTACCATCAAATTCGGAGGACTGGGATTTATGTTCCAGAAAGGCTCCCCAGTGGCCAAGGACTTTTCCAGAGCTATACTGAAGCTCTTAGAGCAGGGAGAATTAAAGAAGTTAGAAGACAAATGGTTGAACACAGATGAGTGCTTCAACAATTCGACCTCCGATAGAACACAAAGTTTGAGGCTTGGAAGTTTCTGGGTTCTGTACGTCCTTTCTGGTGTCACTTCTACTATTTGTTTTCTCCTTTACACCATCCAGTCGCTGAAATCTAGTCACACATTGCAACATGAGGCAGAAGAACGTAATGGCAACCTTAGTGATGAAAGCCAATGGAAAAGGATACTTGATATAGCTAAGCATATCTATAGCAGGAAGCATCCACCATTTACACGCGAGCATCAGCAGGCAATGGCTCCACAATTACCAGATATCATAACGGTGACTTCCCCACCAACAGTTACTGTTCACAACTCTTGA 2688 0.4159 MNLPSTICLSYLLLSFLLITYYQVEATDGENQVISIGVIIDVNSRIGKEQRVAMDLAVQTYNTTSNTYKLALHFQQPIKDPFRPTSLARRMIMRQKMQVIIGMHTWEEAASVAELVRKSQVPVISFAAPSITPPLMPIRWPSLVRMANNGTAYAKCVADMVHAYSWQRVVVIYEDGDYEMLALLSETLQDVGSLIEYRLALPSLSYLSNPAEFIREELFKVIENTQSRVFIVLQSSLEMVIHLFREASQMGLVDGESAWIIPESITNLLDSVNKSAISYMEGALGIKTYYSELSSEYQNFEVRFRKSFRAKYPEEDNSSPGFYALQAHDSIKIVAQAIDRMESDRNTLLREILSSNFVGLSGEIRFEAAQLSQNSTFRIVNVDRKSYRELDFWTPEGGFMSSLPTEQGSNSVSRNTKSLSDVVIWPRKLTTIPKGWNLPTKQKPMKIAVPGRTSFSKFVKVDRDELTNKYKYTGFCIDIFEKVLPLLGYDLPYDFHPVNGTYPDLVQLVYNKTYDAVVGDVTILEERLQYVDFTMPYAESGLSMIVTEKSEESTWMFMKPFTWQMWVATGAVLMYTMVVVWCLERKPNPEFQGNWKSQISTALMFTFSSLFFAHREKIYNNLTRVVMVSWLFLVLILNSSYTASLSSMLTVQRLRPNVTDIECLKKNNMKIGCDGDSFVRTYLEQVEDFKPENILHINSEYSYEDAFKNNTIAAAFLEVPYEKVYISKYCKGYSAFVPTIKFGGLGFMFQKGSPVAKDFSRAILKLLEQGELKKLEDKWLNTDECFNNSTSDRTQSLRLGSFWVLYVLSGVTSTICFLLYTIQSLKSSHTLQHEAEERNGNLSDESQWKRILDIAKHIYSRKHPPFTREHQQAMAPQLPDIITVTSPPTVTVHNS* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0592 895 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 16 865 - -
Pvu3g0592 895 CDD PBP1_GABAb_receptor_plant 35 403 IPR044440 -
Pvu3g0592 895 PANTHER GLUTAMATE RECEPTOR 3.4 16 865 - -
Pvu3g0592 895 SUPERFAMILY Periplasmic binding protein-like II 422 783 - -
Pvu3g0592 895 CDD GluR_Plant 443 780 - -
Pvu3g0592 895 Pfam Bacterial extracellular solute-binding proteins, family 3 469 781 IPR001638 -
Pvu3g0592 895 Gene3D - 151 318 - -
Pvu3g0592 895 Gene3D - 453 553 - -
Pvu3g0592 895 Gene3D - 722 786 - -
Pvu3g0592 895 SUPERFAMILY Periplasmic binding protein-like I 31 436 IPR028082 -
Pvu3g0592 895 Pfam Ligand-gated ion channel 782 811 IPR001320 GO:0015276|GO:0016020
Pvu3g0592 895 SMART GluR_14 446 782 IPR001320 GO:0015276|GO:0016020
Pvu3g0592 895 Gene3D - 333 448 - -
Pvu3g0592 895 PIRSF IGluLR_plant 5 879 IPR017103 -
Pvu3g0592 895 Gene3D - 554 689 - -
Pvu3g0592 895 Pfam Receptor family ligand binding region 52 384 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0592 Pvu-Chr3 7504090 7507762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0592 24 836 Ion Channels AT2G29120 33.138 2.30e-144 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0592 - - gmx:100780320 1409.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0592 3 7504090 7507762 Pvu3g0592 3 7504090 7507762 ECH