Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0584 ATGAGTAGAGGTGGAAATAACATGACAAAATTGGAAGCCGTGGAATATTTAAAAGAAGTGCGGATGAGATTTGAAGACAAGGAAAAGTTCATGGAGTTTTTGAAGATCATAACCGAATATAGAGTTCGCAGAATGAGTGTTGGGAGTGTGGTAGAAAAAGTGGAGGAATTTCTTAAAGGCCACCATGATCTCATTTCTGGATTTAACAACTTTCTGCCAAAGGGATATGAAATCCTTCTTCCACCTAAGGGTCCAGTCCAGTTGGAAGATGCTATCAGATATGTGCAGAAGGTTAAGGATCGATTTGAAGACACAGATGATACCTACAAGGCATTTGTAAAGATATTAACTGATAGGAACAAAAATGGCATGTCAGTTGGTGAAGTATACCATGAGGCAAGTGTTGTCTATGTATTTGTGTGA 423 0.3853 MSRGGNNMTKLEAVEYLKEVRMRFEDKEKFMEFLKIITEYRVRRMSVGSVVEKVEEFLKGHHDLISGFNNFLPKGYEILLPPKGPVQLEDAIRYVQKVKDRFEDTDDTYKAFVKILTDRNKNGMSVGEVYHEASVVYVFV* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0584 140 Pfam Paired amphipathic helix repeat 28 72 IPR003822 GO:0006355
Pvu3g0584 140 Gene3D Paired amphipathic helix 81 137 IPR036600 GO:0006355
Pvu3g0584 140 SUPERFAMILY PAH2 domain 81 134 IPR036600 GO:0006355
Pvu3g0584 140 SUPERFAMILY PAH2 domain 7 76 IPR036600 GO:0006355
Pvu3g0584 140 PANTHER SIN3B-RELATED 11 134 IPR039774 GO:0003714
Pvu3g0584 140 Gene3D Paired amphipathic helix 12 73 IPR036600 GO:0006355
Pvu3g0584 140 ProSiteProfiles PAH domain profile. 84 140 IPR003822 GO:0006355
Pvu3g0584 140 ProSiteProfiles PAH domain profile. 1 75 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0584 Pvu-Chr3 7304092 7304846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0584 4 105 WRKY Transcription Factor Family AT4G12020 34.286 6.78e-15 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu3g0584 PAH 5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0584 K11644 - var:108321439 191.815