Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0580 ATGATGCTTCAATCCTTCCCTTTTCTGACCCTTTTTTTTCTTTTACTTCTCAACACTTTCTCAATACCAACCTGTCATTGCCAAACCACCACTTCTCCTCCTCAGAACATTGAAACTTTCTATCCAAATCAAACTTCAGCACCTCAGCAACCCGAGACATCACCACAGACTCAACCACCTCCACCACCAACTGATAACACAGCACCTGCCCGTGGCTCTTCCGGTGGTAAGATAGCCAAGGCGGTGGCTGCAACTGCCGCCAGCACCATAGTTTTTTGTGGTTTGGTTTTCTTTTTGGTGCAGAGGTGCTTGAGGGCCAGAAAGAGAAAGAGAGAGGTGATAAGTAACACTGCTTCTGGTGGAGATAATCGTGTTGTGCCTCAGGGAAATGGGTTTGAGAGAATTGATGGAAATGTGAAGGGGTTGATTGTGGATGAGGATGGTTTGGATGTTGTTTATTGGAGAAAGCTTCAAGGGAAGAACTCTAACAAGGATCTACATAAGGAGGTTTTGAGTAGTCCCAGAAACAAAGAACAAGAAGATGGGCATGATGAAAATGATGTGAAGAAGTCTAAGTCCGTCCAAGAAGTTCCTCTCCTTAGAGGGAAATCTTCAACTTCCCACTTGAATGTATCTCCAGAAGAGGATGAACCATACAGATTTTCACCAATTTCTTCTCCTGCTGCTTCTGTTCCTACCACTTCTACTCTTCCTTCATCAGCTGGGGTTGTTATCAAGGGTGCTCAGAAACCAGACTCTCCAACTCGGCCATCAACTCCACCCCCTCCAATTTCACCATCAACACCTTCATCCTCTATTTCTATTTCAGCAGTTCCGAAAGCGAATAATCCTGTGCCGGCACCTCCCCCTCCCCCAATCCCAGCCAGAAGGAGTCCAGCACCACCTCCTCCTCCTCCTCCTTCCTCATCAAAACCACCACCTGCTCCCATTGAAATTCCGGCTGTTAAGCAAAGAAACTCTTCAGGAAAAGGCATCCCAGAAACCAGCAATGACCAAGTGAAGCTGAAGCCTCTGCATTGGGATAAGGTGAATACTAATAATGCTGATCACTCCATGGTTTGGGACAAAGTTGATCGTGGCTCTTTCAGGGTTGATCAAGATCTCATGGAAGCTCTCTTCGGTTATGTGGCGACCAACCGGAAATCTCCCAAGGGAACAAGTCACTCAGCCATTCCAAGCAAGGATGCCTCAGCTACATCTGCAAAAATTTTCCTTCTTGACCCGAGAAAATCACAGAACATTGCTATTGTTCTCAAATCTATTGCAGTCTCAGTAGGTGAAATTGTAGATGCACTCACTGATGGTAAGGGCCTCAAACCAGATACCCTTGAAAAGCTTGCTAGAGTTTCCCCAACAGAAGAAGAGCAATCTCTTATCCTTGAATACAAAGGAGACCCAGCAAGACTTGCAGCAGCTGAATCTTTCCTTTATAATATCCTCAAAGCTGTTCCCTCAGCTTATAAGCGCTTGAATGCAATGCTATTCAGGTTGAACTATGACTCTGAGATTCAAGAAACCAAGGAATCTCTGCAGACCATTGAACTGGGATGTAAGGAGCTTAAAAGCAAAGGACTCTTTGTGAAGCTTCTTGAAGCAGTGCTCAAGGCAGGAAACCGAATGAATGCAGGAACTGCAAGGGGCAATGCACAAGCTTTCAATTTGGTTTCTCTAAGGAAACTCTCTGATGTTAAGAGCACCGATGGAAAAACCACATTACTTCACTTTGTGGTTGAAGAGGTAGTTCGTTCTGAGGGAAAACGGGTTGCACTTAACCGCAATGACAGCCTGAGAAGTAGCAGCAGTAGGAGCAGCAGCAGTAGCAGCAATGGAAACTATGAGAATAATGCTGCTTCAACTGAACTGATAGAAAGGGAATATGTGACACTAGGATTGCCAATTGTAGGAGGGATCAGTTCTGAGTTATCCAATGTTAAGAAAGCAGCACAAATAGATTTTAACAATTTAGTGAGTTCAATCTCAGCCCTCTCAACCCGGTTAGTCAAAGTTCAAGAACTGGTTTCCTTGTGTGAGAATAGTGAAGGAGGACATTTTGCAAAAGAAATGGATCATTTTCTTAGAAAGGCTGAGGAAGAGCTGAAATTATTGAGGGAGAAGCAAACAAGTGTATTGCAGCTTGTCAATAAAACAACACAGTATTATCAAGGAGGAGCTTCAAAAGAAACTGCAGAAGACAATCTTCAATTGTTTCTCATAGTGAAGGATTTTCTGGGAATGGTTGATCAAGTTTGCATTGAGATTGCACGTGACAAGCAGAAAAGGAAATTTCCTCCAAGGGCCATTTTTGGGTAG 2331 0.4406 MMLQSFPFLTLFFLLLLNTFSIPTCHCQTTTSPPQNIETFYPNQTSAPQQPETSPQTQPPPPPTDNTAPARGSSGGKIAKAVAATAASTIVFCGLVFFLVQRCLRARKRKREVISNTASGGDNRVVPQGNGFERIDGNVKGLIVDEDGLDVVYWRKLQGKNSNKDLHKEVLSSPRNKEQEDGHDENDVKKSKSVQEVPLLRGKSSTSHLNVSPEEDEPYRFSPISSPAASVPTTSTLPSSAGVVIKGAQKPDSPTRPSTPPPPISPSTPSSSISISAVPKANNPVPAPPPPPIPARRSPAPPPPPPPSSSKPPPAPIEIPAVKQRNSSGKGIPETSNDQVKLKPLHWDKVNTNNADHSMVWDKVDRGSFRVDQDLMEALFGYVATNRKSPKGTSHSAIPSKDASATSAKIFLLDPRKSQNIAIVLKSIAVSVGEIVDALTDGKGLKPDTLEKLARVSPTEEEQSLILEYKGDPARLAAAESFLYNILKAVPSAYKRLNAMLFRLNYDSEIQETKESLQTIELGCKELKSKGLFVKLLEAVLKAGNRMNAGTARGNAQAFNLVSLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRVALNRNDSLRSSSSRSSSSSSNGNYENNAASTELIEREYVTLGLPIVGGISSELSNVKKAAQIDFNNLVSSISALSTRLVKVQELVSLCENSEGGHFAKEMDHFLRKAEEELKLLREKQTSVLQLVNKTTQYYQGGASKETAEDNLQLFLIVKDFLGMVDQVCIEIARDKQKRKFPPRAIFG* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0580 776 Pfam Formin Homology 2 Domain 336 753 IPR015425 -
Pvu3g0580 776 Coils Coil 692 719 - -
Pvu3g0580 776 MobiDBLite consensus disorder prediction 598 621 - -
Pvu3g0580 776 MobiDBLite consensus disorder prediction 198 212 - -
Pvu3g0580 776 MobiDBLite consensus disorder prediction 33 52 - -
Pvu3g0580 776 MobiDBLite consensus disorder prediction 254 268 - -
Pvu3g0580 776 MobiDBLite consensus disorder prediction 33 74 - -
Pvu3g0580 776 MobiDBLite consensus disorder prediction 53 67 - -
Pvu3g0580 776 Gene3D Formin, FH2 domain 352 771 IPR042201 -
Pvu3g0580 776 MobiDBLite consensus disorder prediction 226 242 - -
Pvu3g0580 776 ProSiteProfiles Formin homology-2 (FH2) domain profile. 332 776 IPR015425 -
Pvu3g0580 776 MobiDBLite consensus disorder prediction 165 345 - -
Pvu3g0580 776 PANTHER FORMIN-RELATED 1 772 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pvu3g0580 776 Coils Coil 510 530 - -
Pvu3g0580 776 MobiDBLite consensus disorder prediction 599 621 - -
Pvu3g0580 776 MobiDBLite consensus disorder prediction 282 319 - -
Pvu3g0580 776 PANTHER FORMIN-LIKE PROTEIN 1 772 - -
Pvu3g0580 776 SMART it6_source 332 768 IPR015425 -
Pvu3g0580 776 MobiDBLite consensus disorder prediction 165 196 - -
Pvu3g0580 776 SUPERFAMILY Formin homology 2 domain (FH2 domain) 345 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0580 Pvu-Chr3 7193391 7196321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0580 1 768 FH2 protein (formin) Gene Family AT1G70140 45.663 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0580 - - vun:114178801 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0580 3 7193391 7196321 Pvu9g1890 9 26969712 26972313 ECH
Pvu3g0580 3 7193391 7196321 Pvu3g0580 3 7193391 7196321 ECH
Pvu2g0797 2 11444474 11447337 Pvu3g0580 3 7193391 7196321 PCT