Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0579 ATGGACTCCAACACTCTCGTTTCATGGCCGAGGATGTCAGAAAACATCGAGGCTTTTGGTCTTTCACCCAAGAAATCCGAACAGGTTCATGTTTTAGCAGTTGATGACAGCCTCGTTGATCGCAAAGTCATCGAACGCTTGCTCAAAGTCCTAGCTTACAAAGTTACTGCTGTGGATAGTGGGCTGAGAGCACTACAATTGCTTGGACTATTGGACGAGCAGAAAATTCCCTCTGAAGCTAATGGTTTTGCTGGTTTAAAGGTGGATCTAATCATCACAGACTACTGTATGCCTGGAATGACAGGTTATGAATTACTGAAGAAAATCAAGGAATCGTCCACTTTCAAGGAAACTCCTGTGGTGATTATGTCCTCTGAAAACGTTTTGCCACGCATAGACAGATGTTTGGAGGAGGGTGCAGAGGATTTCATAGTTAAGCCAGTGAAGTTATCTGACGTGAAGCGTTTGAAGGATTACATGGCAACGAAGGAGGCTAAGGTTGAAGGCCAAGACAGGGAAGGGATCCACAAAAGGAAGCTATTAGACGCTTCTGATGTGTCGTCATCATCACCACCGTCTACTTCCTCCTCATCACTTCCACCATCTTCACCCTCAGTCATTGACTCTCCAATCAGACGGCTTAAAATGACCAGCACTGATTGA 663 0.451 MDSNTLVSWPRMSENIEAFGLSPKKSEQVHVLAVDDSLVDRKVIERLLKVLAYKVTAVDSGLRALQLLGLLDEQKIPSEANGFAGLKVDLIITDYCMPGMTGYELLKKIKESSTFKETPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLKDYMATKEAKVEGQDREGIHKRKLLDASDVSSSSPPSTSSSSLPPSSPSVIDSPIRRLKMTSTD* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0579 220 Gene3D - 29 196 - -
Pvu3g0579 220 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 10 209 - -
Pvu3g0579 220 CDD REC_typeA_ARR 31 156 - -
Pvu3g0579 220 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 209 IPR045279 GO:0009736
Pvu3g0579 220 MobiDBLite consensus disorder prediction 167 183 - -
Pvu3g0579 220 MobiDBLite consensus disorder prediction 167 220 - -
Pvu3g0579 220 SUPERFAMILY CheY-like 28 156 IPR011006 -
Pvu3g0579 220 Pfam Response regulator receiver domain 31 153 IPR001789 GO:0000160
Pvu3g0579 220 SMART REC_2 29 160 IPR001789 GO:0000160
Pvu3g0579 220 MobiDBLite consensus disorder prediction 184 205 - -
Pvu3g0579 220 ProSiteProfiles Response regulatory domain profile. 30 161 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0579 Pvu-Chr3 7164501 7165990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0579 23 212 Response Regulator Gene Family AT1G59940 59.809 2.02e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu3g0579 Response_reg 5.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0579 K14492 - gmx:100527828 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0579 3 7164501 7165990 Pvu9g1889 9 26960006 26962365 ECH
Pvu3g0579 3 7164501 7165990 Pvu3g0579 3 7164501 7165990 ECH
Pvu2g0795 2 11419098 11420588 Pvu3g0579 3 7164501 7165990 PCT