Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0576 ATGACTTACACCAACCCCATCACCCTTTTCCTCTTCCTCTCTCTCTCATTCCTCCCCTCCATGCAAACCAAGCTCACTCCCGACTACTACCAAAAAACCTGCCCCAAATTCCCCGACACCGTCCGGAGAATCGTTAACGAAAAGCAGCACAACACGCCATCCACGGCCGCCGCCACGCTCCGCCTCCTCTTTCACGACTGCATGGTGGGCGGCTGCGACGCCTCCATCCTCGTCACCTCCAACTCCTACAACAAGGCCGAGCGCGACCACGCCGTCAACCTCCCCCTCTCCGGCGACGGCTTCGACGCCGTCTCGCGTGTAAAGAACTCCCTCGAGCTCGAGTGCCCCGGCGTCGTCTCCTGCGCTGACATCCTCGCCGCCGCTGCCCGCGAACTGGTGATCAACTCCGGCGGCCCCTCCTTCACGATCCAGTTCGGGCGAAAAGACTCCCTCGAATCCAAAGAATCGAGCTCCGCAAACCAATTCCCATTACCGAACATGACTATCTCCCAAGTGATCCCCCTCTTCGCCAAAAAAGGATTCTCCGTCCAGGAAATGGTGGCCCTGGTCGGCGCGCACACCATAGGGATGTCCCACTGCGACCAGTTCGCCAACAGGCTCTTCAAGTTCAGCAAAACTTCCGAAACCGACCCCGAGTATAACCCCGAGTACGCGGCGGGGCTGAGGAAGCTCTGCGAGAACTACATGAAGGACTCTTCCATGGCGGCTTACAACGACGTGATAACTCCGGTGAAGTTCGACAACATGTATTTCAAGAACTTGCGGAGAGGGTTGGGGTTGCTGGCCACCGACACTGCCATGTCCAAGGATCCGAGGACGAAGCCCTTCGTTGACACCTACGCCAATGATGAAGCGAAGTTCTTCCAGGACTTCGCACGTGCCATCGAAAAGCTCAGCATCTTGGACGTTAAGACCGGAAAGGAAGGGGAGGTGCGGAGCAGGTGTGATTCCTTCAACACGCTTCCTATGTGA 993 0.575 MTYTNPITLFLFLSLSFLPSMQTKLTPDYYQKTCPKFPDTVRRIVNEKQHNTPSTAAATLRLLFHDCMVGGCDASILVTSNSYNKAERDHAVNLPLSGDGFDAVSRVKNSLELECPGVVSCADILAAAARELVINSGGPSFTIQFGRKDSLESKESSSANQFPLPNMTISQVIPLFAKKGFSVQEMVALVGAHTIGMSHCDQFANRLFKFSKTSETDPEYNPEYAAGLRKLCENYMKDSSMAAYNDVITPVKFDNMYFKNLRRGLGLLATDTAMSKDPRTKPFVDTYANDEAKFFQDFARAIEKLSILDVKTGKEGEVRSRCDSFNTLPM* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0576 330 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 PANTHER - 10 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 Pfam Peroxidase 44 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 Gene3D - 28 326 - -
Pvu3g0576 330 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 PANTHER PEROXIDASE 6 10 328 - -
Pvu3g0576 330 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Pvu3g0576 330 Gene3D Peroxidase, domain 2 163 305 - -
Pvu3g0576 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Pvu3g0576 330 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g0576 330 CDD secretory_peroxidase 24 325 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0576 Pvu-Chr3 7096970 7098143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0576 5 328 Peroxidase AT5G47000 54.908 3.90e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0576 K00430 - gmx:100781063 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0576 3 7096970 7098143 Pvu2g0741 2 9822329 9825223 PCT