Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0568 ATGATTGTAATGATCTTTTCGATTCACTGTTTGATACATGATCCTGTGCATACATGTCTACAGCAAACAAATGGGTGGCCTCTGCAACTTCTATCTGTTGCATGTTTGTCTTTGGCAGCAAAGATGGAGGAACCTCTTGTTCCATCTCTCTTGGACCTTCAGATAGAAGGTGCCAAGTACATGTTTGAGCCGAGAACAATTCGTAAGATGGAGCTACTTGTTCTCGGTGTATTGGATTGGAGGCTAAGATCAGTAACCCCACTTTGTTTCCTCGCTTTCTTTGCGTGCAAAGTAGATTCAACAGGAACTTTTACCACGTTTCTCATTTCCCAGGCCACGGAAATCATCGTGTCTAATATTCAAGAGGCTAGCTTTCTTGCTTACAGGCCGTCATGCATTGCTGCCGCAGCCATAGTATCTGCGGCTAAGGAAATTCCTAATTGGGCTGCCCTTAAGCCTGAGCATGCTGAGTCATGGTGCGAGGGACTAAGAAAAGAAAAAATTATAGGATGCTACCAGTTGATGCAAGAACTTGTGGTTAATAATAACCGTAGAAAACTCCCTATAGTGTTGCCGCAGCTGCGAGTAACAACTCGGACTCGAATGAGGTCAAGTGTCACATCATTCTCATCGTCATCCTCTTCTTCATCTTCCTTCTGCTTGTCTTGTAAGAGGAGGAAATTAAATAACTGTTTGTGGGTAGACGACAAAGGGAACTCCGAGTGA 726 0.4394 MIVMIFSIHCLIHDPVHTCLQQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQIEGAKYMFEPRTIRKMELLVLGVLDWRLRSVTPLCFLAFFACKVDSTGTFTTFLISQATEIIVSNIQEASFLAYRPSCIAAAAIVSAAKEIPNWAALKPEHAESWCEGLRKEKIIGCYQLMQELVVNNNRRKLPIVLPQLRVTTRTRMRSSVTSFSSSSSSSSSFCLSCKRRKLNNCLWVDDKGNSE* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0568 241 SUPERFAMILY Cyclin-like 19 82 IPR036915 -
Pvu3g0568 241 CDD CYCLIN 25 75 IPR013763 -
Pvu3g0568 241 Gene3D - 8 76 - -
Pvu3g0568 241 Pfam Cyclin, C-terminal domain 85 190 IPR004367 -
Pvu3g0568 241 PANTHER CYCLINS 22 229 IPR039361 -
Pvu3g0568 241 SMART Cyclin_C_2 85 218 IPR004367 -
Pvu3g0568 241 Gene3D - 77 195 - -
Pvu3g0568 241 Pfam Cyclin, N-terminal domain 27 82 IPR006671 -
Pvu3g0568 241 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 22 229 - -
Pvu3g0568 241 SUPERFAMILY Cyclin-like 67 180 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0568 Pvu-Chr3 6985124 6987566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0568 20 240 Core Cell Cycle Gene Families AT1G70210 56.502 1.64e-80 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0568 K18810 - gmx:100818190 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0774 2 10835443 10842097 Pvu3g0568 3 6985124 6987566 PCT