Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0556 ATGGGTTGCAAGGACATGACAAAGGTGAAGTGGGGGAAGAGGAGGAGGAGGAGGCAAGAGGGTGTGGAGAGGAGGATGAAGAAGCTGCAGCGGCTGGTTCCCGGCGGCGCCGGAATGAACCCCGACCGGCTTTTCCTCAAGACGGCGGAGCACATCTTGCAATTGAGGATCCAACTCAATGTGTTGCAAGCTCTTTCCAAGGTTTTCAATGCTTGA 216 0.5509 MGCKDMTKVKWGKRRRRRQEGVERRMKKLQRLVPGGAGMNPDRLFLKTAEHILQLRIQLNVLQALSKVFNA* 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0556 71 PANTHER TRANSCRIPTION FACTOR 3 69 - -
Pvu3g0556 71 CDD bHLH_AtIBH1_like 12 65 IPR044549 GO:0006355
Pvu3g0556 71 MobiDBLite consensus disorder prediction 1 23 - -
Pvu3g0556 71 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 69 IPR044660 GO:0006355
Pvu3g0556 71 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 67 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0556 10 65 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43060 42.623 2.47e-07 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0556 - - vra:106779907 127.487