Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0546 ATGAAGGGGGATAGGATTGAAGAGAGCAGCAGTACGAGGTTGTTGGGTAGAAGCAGCAGTGGTGGGAGCAGTGAGTCAAGGTGGGTTGATGGCAGTGAAGTGAACTGGGATGAGGTTCCTGTGTGGTCAAAGCATGCTGACGGCAGAGAAGGGTATGGGTCAATCAGGAGGAGGCTTGCCAAGTTGCCCAAGAGGGTTGACTCATTTGATGTTGAAGCCATGGAGATTGCTGGAACTCAAGCTGACCACTCCAAGGTCCTTTCCCTCTTGCCCACACTTGCTTTGGCATTTAAGACTCTTGGTGTGGTATATGGTGACATGGGAACTAGTCCTCTATATGTTTTTGCTGATGTCTTCAGCAAGGTTCCAATTGGATCAGATGAGGATGTCTTGGGGGCATTATCATTAGTCATGTATACAATAGCAGTTATTCCATTAGCCAAGTACGTTTTTATAGTCCTCAAAGCAAATGATAATGGAGAAGGAGGAACGTTTGCACTATACTCGTTGATTTGCAGGTATGCAAATGTGAGTCTACTTCCAAATCGTCAACAAGCTGATGAATATATATCCAGTTTTAAGCTCAAACTGCCTACTCCAGAACTGGAAAGGGCTTTAAAAATAAAGGATACTCTGGAAAAAAAAACGTTTTTGAAGAACCTTATATTGGTGTTGGTTCTTGTGGGAGCTTCCATGGTTATTGGAGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCCATAAGTGGTCTGGAGGATCAAATAAATGGATTTGGTACTGGTGAAGTGGTTGGTATTTCTATTGTAGTCCTGATAGCATTGTTCAGCATACAACAGTTTGGTACCAGTAAAGTGGGTTTCTTGTTTGCCCCTATACTTGCCTTATGGTTCTTTTGTCTGGGTTCTATTGGAGTATATAATATACTTAAATATGATATCACTGTTCTGAGAGCATTCAATCCGGCTTATATCTATTATTTCTTCAAGAAAAATGGCAAAGCTGCATGGTCATCTCTTGGTGGTTGTGTTCTGTGCATTACAGGTGCAGAAGCAATGTTTGCAGATTTGGGTCATTTTTCTGTACCATCAATACAGATTGCCTTCACTTGTGTGGTATTTCCCTGTCTCCTCCTTGCTTATATGGGCCAAGCTTCTTTTTTGATGAAGAACCCAAGTTTTTATTCAAATGTATTCTACAAGTCTGTTCCAGAGAGTCTGTTCTGGCCAGTGTTTGTGATAGCCACACTTGCTGCTATGATTGCCAGCCAAGCAATGATATCTGCTACATTTTCGTGCATAAAGCAATCTATGGCTTTGGGATGCTTCCCCAGGCTCAAGATAATTCACACCTCAAAAAAGTTCATGGGCCAAATTTATATCCCCATAGTAAACTGGTTTCTGATGATCATGTGCATAGTTGTGGTTTCCATATTTCAAAGCACAACTGATATTGCAAATGCATATGGCATTGCTGAAGTTGGTGTCATGATGGTTAGCACCATCTTGGTGACCCTAGTAATGGTTTTAATTTGGCAGACTAACTTGCTTTTGACATTGTGTTTCTGTCTTGGATTTGGTTCAGTGGAGTTAATTTACATGTCTTCTGTCCTATCCAAACTCGTTGAGGGTGGTTGGCTTCCACTTGCCTTTGCTACCTGTTTCCTATCTGTGATGTACACTTGGAACTATGGCAGTGTATTGAAGTACCGAAGTGAAGTTAGAGAGAAGGTTTCAGTGGACACAATGCTTGAGCTTGGCTCCAATCTTGGAACAGTAAGAGTGCCCGGAATAGGATTGCTATATAATGAGCTTGTGCAGGGCATTCCCTCCATTTTCTTGCAGTTCTTGCTGAACCTTCCGGCTCTTCACTCAACTATAGTTTTTGTCTGCATTAAATATGTCCCAGTCCCTGTGGTTCCTCAAGAGGAAAGATTTCTATTTCGAAGAGTTTGCCCCAAAGATTACCACATATTCCGCTGTGTTGCTAGATATGGTTACAAAGATGTAAGGAAGGAAGATCACCAAGCATTTGAGCAACTTCTTATTGAGAGTCTTGAGAAATTCTTGAGAAGGGAAGCTCTTGAGACAGCCTTGGAGTTCGAGGGCAACTTAACTGATGACGTGGACAGTGTCTCAGCAAATACAAGGGACTCTGATCTTCCTGTTGGTACTGGTGCTGAGGAGCTTAGGATTCCACTGATGCATGATCAGAAAATGGAAGAAACAGGAACTTCTGCTGCTCAAGAAGTTGCATCAGCATTGCCATCTAGTTACATGTCATCAGACGAAGACCCTAGTCTTGAATATGAGCTTTCAGCCCTTAGAGAAGCAACGGAATCAGGATTCACCTATTTGCTTGGACATGGAGATGTGAGGGCAAAGAAGAACTCTTTTTTCTTTAAGAAACTAATGATAAATTATTTCTATGCATTTCTCAGAAATAACTGCCGAGGAGGTACAGCAAACATGAGAGTACCTCACACCAATATCATTCAAGTTGGGATGACATATATGGTTTGA 2523 0.4189 MKGDRIEESSSTRLLGRSSSGGSSESRWVDGSEVNWDEVPVWSKHADGREGYGSIRRRLAKLPKRVDSFDVEAMEIAGTQADHSKVLSLLPTLALAFKTLGVVYGDMGTSPLYVFADVFSKVPIGSDEDVLGALSLVMYTIAVIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVSLLPNRQQADEYISSFKLKLPTPELERALKIKDTLEKKTFLKNLILVLVLVGASMVIGDGILTPAISVMSAISGLEDQINGFGTGEVVGISIVVLIALFSIQQFGTSKVGFLFAPILALWFFCLGSIGVYNILKYDITVLRAFNPAYIYYFFKKNGKAAWSSLGGCVLCITGAEAMFADLGHFSVPSIQIAFTCVVFPCLLLAYMGQASFLMKNPSFYSNVFYKSVPESLFWPVFVIATLAAMIASQAMISATFSCIKQSMALGCFPRLKIIHTSKKFMGQIYIPIVNWFLMIMCIVVVSIFQSTTDIANAYGIAEVGVMMVSTILVTLVMVLIWQTNLLLTLCFCLGFGSVELIYMSSVLSKLVEGGWLPLAFATCFLSVMYTWNYGSVLKYRSEVREKVSVDTMLELGSNLGTVRVPGIGLLYNELVQGIPSIFLQFLLNLPALHSTIVFVCIKYVPVPVVPQEERFLFRRVCPKDYHIFRCVARYGYKDVRKEDHQAFEQLLIESLEKFLRREALETALEFEGNLTDDVDSVSANTRDSDLPVGTGAEELRIPLMHDQKMEETGTSAAQEVASALPSSYMSSDEDPSLEYELSALREATESGFTYLLGHGDVRAKKNSFFFKKLMINYFYAFLRNNCRGGTANMRVPHTNIIQVGMTYMV* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0546 840 TIGRFAM kup: potassium uptake protein 95 840 IPR003855 GO:0015079|GO:0016020|GO:0071805
Pvu3g0546 840 MobiDBLite consensus disorder prediction 12 30 - -
Pvu3g0546 840 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 9 840 IPR003855 GO:0015079|GO:0016020|GO:0071805
Pvu3g0546 840 MobiDBLite consensus disorder prediction 1 30 - -
Pvu3g0546 840 PANTHER POTASSIUM TRANSPORTER 12-RELATED 9 840 - -
Pvu3g0546 840 Pfam K+ potassium transporter 96 669 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0546 Pvu-Chr3 6575762 6581415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0546 4 840 Inorganic Solute Cotransporters AT1G60160 73.214 0.0 1228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0546 K03549 - gmx:100814419 1484.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0546 3 6575762 6581415 Pvu2g0749 2 10241561 10246823 PCT