Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0543 ATGGCTTCTCCTCTCAGAATTTCAAGGCTCATCTCTCGCTCCTTTTCTTCTACTTCCTTCTCTGCACGAGGTGGGAATAGTTACCTTGGCCCCAGACTCTGTAAATACAGTACTGCTGCCGCCATTGAAGAACCCATTAAACCAGCAGTGCAAGTGGAATACACCCAACTCTTAATTGATGGGAAATTCGTAGATGCTGCTTCTGGTAAAACTTTTCCAACTTTGGATCCAAGGACGGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATATTGATCGAGCGGTTGCAGCTGCGCGCAAAGCATTTGATCATGGTCCATGGCCTAGGATGACAGCTTATGAAAGGCAAAGGATCTTGTTACGTGCAGCTGATCTGATTGAGAAGCATAATGATGAGATTGCAGCACTTGAGACTTGGGATAATGGAAAGCCTTATGAACAATCTGCTAAGATTGAGATTCCAATGCTTGTTCGTCTGTTCCGCTACTATGCTGGTTGGGCAGATAAGATTCATGGTCTAACAGTTCCAGCTGATGGACCTTATCACGTGCAAACTTTGCATGAACCCATTGGTGTTGCGGGTCAGATCATTCCTTGGAACTTCCCTCTTGTCATGTTTGCCTGGAAGGTTGGACCAGCGTTGGCCTGTGGCAACACCATTGTTCTCAAAACAGCTGAGCAGACACCATTATCTGCTTTCTATGTAGCAAAACTATTTCTCGAGGCTGGACTTCCTCCTGGTGTTTTAAATGTGGTTTCAGGATTTGGACCAACTGCTGGTGCTGCTCTTGCAAGTCACATGGAGGTTGATAAGCTTGCTTTTACTGGTTCCACTGATACTGGGAAAGTTGTCCTTCAATTGGCGGCTAAAAGCAATCTTAAGCCTGTAACTTTGGAGCTTGGTGGAAAATCCCCGTTTATTGTGTGTGAAGATGCTGACATAGATCAGGCTGTTGAGCTAGCACACTTTGCTTTATTCTTTAATCAGGGACAATGTTGCTGTGCTGGGTCACGAACATATGTACACGAAAGTGTATACGATGAGTTTGTTGAGAAAGCAAAGGCTCGTGCTTTGAAACGTGTTGTTGGCGATCCATTCAAGGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAGCAATTCGAGAAAATCCTGAGGTATGTCAGACTTGGGGTTGAAAGTGGGGCTACCCTTGAAACAGGAGGAGACAGACTTGGCGACAAGGGCTACTACATTCAACCTACTGTCTTCTCAAATGTTAAGGATGACATGCGGATTGCAACGGATGAAATCTTTGGTCCAGTCCAATCCATATTGAAATTCAAGGACCTTGGTGAGGTAGTTCAAAGAGCAAATAACTCACGATATGGGCTTGCAGCAGGAGTGTTCACAAAGAACATAGACACTGCCAACATTTTGACTCGGGCACTGAGAGTAGGAACAGTTTGGATAAATTGCTTTGACACATTTGATGCTGCAATTCCCTTTGGTGGTTACAAGATGAGTGGTCAGGGCAGAGAAAAAGGAGAGTATAGTCTTAAGAACTACTTGCAAGTGAAGGCAGTTGTTAACTCCCTGAAGAACCCAGCATGGCTTTGA 1608 0.4509 MASPLRISRLISRSFSSTSFSARGGNSYLGPRLCKYSTAAAIEEPIKPAVQVEYTQLLIDGKFVDAASGKTFPTLDPRTGEVIAHVAEGHSEDIDRAVAAARKAFDHGPWPRMTAYERQRILLRAADLIEKHNDEIAALETWDNGKPYEQSAKIEIPMLVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQTPLSAFYVAKLFLEAGLPPGVLNVVSGFGPTAGAALASHMEVDKLAFTGSTDTGKVVLQLAAKSNLKPVTLELGGKSPFIVCEDADIDQAVELAHFALFFNQGQCCCAGSRTYVHESVYDEFVEKAKARALKRVVGDPFKGGIEQGPQIDSEQFEKILRYVRLGVESGATLETGGDRLGDKGYYIQPTVFSNVKDDMRIATDEIFGPVQSILKFKDLGEVVQRANNSRYGLAAGVFTKNIDTANILTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVNSLKNPAWL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0543 535 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 301 308 IPR029510 GO:0016491
Pvu3g0543 535 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 27 535 - -
Pvu3g0543 535 Pfam Aldehyde dehydrogenase family 63 525 IPR015590 GO:0016491
Pvu3g0543 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 307 496 IPR016163 GO:0016620
Pvu3g0543 535 SUPERFAMILY ALDH-like 51 528 IPR016161 GO:0016491
Pvu3g0543 535 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 27 535 - -
Pvu3g0543 535 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
Pvu3g0543 535 CDD ALDH_F2BC 52 526 - -
Pvu3g0543 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 69 525 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0543 Pvu-Chr3 6528311 6532161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0543 6 535 Aldehyde Dehydrogenase Gene Family AT3G48000 78.464 0.0 890
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0543 3 6528311 6532161 Pvu3g0543 3 6528311 6532161 ECH
Pvu2g0747 2 10112472 10116406 Pvu3g0543 3 6528311 6532161 PCT