Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0541 ATGAAATTTCAAGGGAAAAGATCCTTGCTATTGCTTCTCCTGCTTTCTATCACCCTTTATCTTGGATCTTCTCAAACTTCTGTTTCTAACTGTGTCCTTGATATTCCATCTTCTTCATCCTTGGTTAGTTCGAATTGTGAATTGTACCATTGGGGAGGGTTTACCAATGGCTGTTGTGGACCATATTTTGGGGATTACCTTTATGCCTTGGGGGTGAGGACAAACCAAACTGGCAAAGTCTTTTTGAATCCCTCAGAGCAAAAAAACTGTATAGCATCAATGGAAGCTTTTGACAAATATTTTACCTGTTATGGAATAGAGAAGCTAACAAGTGGAACTGGTGGTTGTTCTGATTACACCATCACAGATGTTATTAATCAGCTTGGAGACAAGCTTAGGAGATTGGAGGAAGAATGCATGCCTTTAAGCACAAATGGTAGGCCAAATGAAACTTGCACTAAATGTTTGAAAGCATGGGAGGATACCAGAGGACCAGAGTCAGCAAATATCAGTTCTTATCTTTGTAGGTTTGCTGTGCTTGTCTCACTAACAAGCACAAGAATTTTTGATAAGGAATCAATTCTAGAAGTTTATAAATGCCTCGGGGAACATGCCCTTTCTGCAGGATTTGCTTCAGCTAATCAAGAAGTGAAGGCTAGGGGCAATGCTAATATCAACTCAGGTCTCTGGATTGCATTTGGCATAACAGGAGTTATAGTATTGGTGTTTCTTGCCGCAGTAGCATTATTTGTCAGAAGAAATAGAAGTGTTCCATCCGTACAAAATGAGTCTTCTGATTCACCTTCACTGAAGATAACTTTGAAGGATGTTTATGCAGCAACAAGCAATCTCAGTGCTTCAAATTTCATAGGCCAAGGCATAGCCGGAAAAGTGTACAAAGGTGTACTCTCCAACAACCAATCTGTTGCAGTGAAGCATATCACCAGTGAATGTTACATGGAGACATTTGTTAGAGAAGTGAGAAGCCTTTACCATGTTAGACATCACAACCTAGTAGCTTTGCTGGGATACTGTGAAAGTGAAGGTGAATGCTTCCTAGTGTATGAGCTATGCCACAATGGAAACCTCTCAGAATGGCTATTTGGCAATGGTAAAGTTCTTTCATGGATTCAAAGACTAGAGATTGCCATTGACAGTGCAAGAGGCCTTCAGTTTCTCCATACCTACCCAAATGGCTGCATCGTTCACCGTGATATAAAGCCATCAAACATTCTTATTGATGCTAAGTTCCAAGCAAAGCTTTCAGACTTTGGGTTGTCCAGGGTTATGGACTTGGGTCAATCCTATGTGAGCTCTGAAGTAAGAGGAACATTTGGTTATATTGATCCTGAATATAGGACAAATCACCAAGTTAAGGCCTCTGGAGATGTCTACAGCTTTGGAATAGTGTTATTGCAACTTCTATCAGGACAAAGGATCATTAACATTGATTTCAACAGACCAATGTCTCTGGGTAAAATGGCCAGAGATGTTGTTAGAGGTGGTGTTATTTCAGAATTTGCTGATCCTAAACTCAAAGGGGAGTACTCAGTTGAAGCATTTGACATCGTACTAAAGCTAGCTTTGTCTTGCGTAGGGCTCAAAAGGCAAAGACCCTCTATAGATCAAGTGTTATATAGCCTAGAAAAGACACTAGATATTTCATTATAA 1671 0.401 MKFQGKRSLLLLLLLSITLYLGSSQTSVSNCVLDIPSSSSLVSSNCELYHWGGFTNGCCGPYFGDYLYALGVRTNQTGKVFLNPSEQKNCIASMEAFDKYFTCYGIEKLTSGTGGCSDYTITDVINQLGDKLRRLEEECMPLSTNGRPNETCTKCLKAWEDTRGPESANISSYLCRFAVLVSLTSTRIFDKESILEVYKCLGEHALSAGFASANQEVKARGNANINSGLWIAFGITGVIVLVFLAAVALFVRRNRSVPSVQNESSDSPSLKITLKDVYAATSNLSASNFIGQGIAGKVYKGVLSNNQSVAVKHITSECYMETFVREVRSLYHVRHHNLVALLGYCESEGECFLVYELCHNGNLSEWLFGNGKVLSWIQRLEIAIDSARGLQFLHTYPNGCIVHRDIKPSNILIDAKFQAKLSDFGLSRVMDLGQSYVSSEVRGTFGYIDPEYRTNHQVKASGDVYSFGIVLLQLLSGQRIINIDFNRPMSLGKMARDVVRGGVISEFADPKLKGEYSVEAFDIVLKLALSCVGLKRQRPSIDQVLYSLEKTLDISL* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0541 556 PANTHER - 24 555 - -
Pvu3g0541 556 SUPERFAMILY Protein kinase-like (PK-like) 259 548 IPR011009 -
Pvu3g0541 556 ProSiteProfiles Protein kinase domain profile. 284 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0541 556 Pfam SPARK 27 164 IPR043891 -
Pvu3g0541 556 Gene3D Transferase(Phosphotransferase) domain 1 358 555 - -
Pvu3g0541 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 401 413 IPR008271 GO:0004672|GO:0006468
Pvu3g0541 556 PANTHER OS01G0750732 PROTEIN 24 555 - -
Pvu3g0541 556 Pfam Protein kinase domain 288 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0541 556 SMART serkin_6 284 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0541 556 Gene3D Phosphorylase Kinase; domain 1 245 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0541 Pvu-Chr3 6512775 6515848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0541 272 554 Receptor kinase-like Gene Family AT4G39110 40.972 6.39e-59 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Pvu3g0541 Pkinase 3.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0541 - - gmx:100790181 912.138