Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0533 ATGGGTTTCTGTAGCAACGGCAGAGAAGAGAGTGAAATGTATCACGCTCAAATCCACCTCTACAAACACGTCTACAACTTCGTGAGCTCCATGGCCCTCAAGTCCGCCATGGAATTAGGTGTTGCGGACGCAATCCACAGCCACGGAGAAGCCATGACCGTTTCTGAGTTAGCCTCTGCACTGAAACTGCACCCCTCAAAAGTCTCTGTCCTCCACCGATTCATGCGCCTTCTAACACATAATGGGTTCTTCGCCAAAACAACAGTGGCGTCACGTAAAGAAGGAGGAGGAGGAGGAGAAGAAACAGTGTATGATCTGACCCCTCCTTCCAAGCTTCTAATCCGAAGCAAGTCAACGTGTTTGGCTCCTATTGTTAAGGGCGCGCTTCATTCGAGTTCCATCGACATGTGGCACTCCTCCAAGAAGTGGTTCACTGAGGATGAGAAGGAACTCTCACTGTATGAGAGTGCCAAGGGGGAGAAAGCCATGGCAGCAGATTCTGGAATGTTGAAGATAGCTCTGGAAGAGTGCAAGCATGTGTTTGAGGGATTGGGTTCCCTTGTCGATGTGGGAGGTGGGACTGGTACTCTCACCAGGCTCATCAATGAACTCTTCCCTCACATGAAATGCACGGTGTTTGATCAACCACAGGTTGTGGCTAACATGACTGGAACAGAAAATTTGAACTTTATTGGTGGAGATATTTTCAAATCCATCCCTTCTGCTGATGCAGTTTTACTCAAGTGGGTTCTGCATGATTGGAACGACGAGCTCTCAGTGAAGATATTGAAGAACTGCAAAGAAGCGATTTCAGGGAAAGGGAAAGAAGGAAAAGTGATAATCATAGACATAGCTATTGATGAAACAAGTGATGATCGCGAATTGACAGAGTTGAAGATGGACTATGACTTGGTGATGCTCACTATGTTCAATGGAAAAGAAAGAGACAGAAAAGAGTGGGAGAAAATTATTTACGATGCAGGCTTCAGCAGCTACGACATCACCCCTATATGTGGCTTCAAATCTCTCATCCAACTTTATCCTTAA 1047 0.4613 MGFCSNGREESEMYHAQIHLYKHVYNFVSSMALKSAMELGVADAIHSHGEAMTVSELASALKLHPSKVSVLHRFMRLLTHNGFFAKTTVASRKEGGGGGEETVYDLTPPSKLLIRSKSTCLAPIVKGALHSSSIDMWHSSKKWFTEDEKELSLYESAKGEKAMAADSGMLKIALEECKHVFEGLGSLVDVGGGTGTLTRLINELFPHMKCTVFDQPQVVANMTGTENLNFIGGDIFKSIPSADAVLLKWVLHDWNDELSVKILKNCKEAISGKGKEGKVIIIDIAIDETSDDRELTELKMDYDLVMLTMFNGKERDRKEWEKIIYDAGFSSYDITPICGFKSLIQLYP* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0533 348 SUPERFAMILY "Winged helix" DNA-binding domain 10 116 IPR036390 -
Pvu3g0533 348 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 348 IPR016461 GO:0008168
Pvu3g0533 348 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Pvu3g0533 348 Pfam O-methyltransferase domain 161 330 IPR001077 GO:0008171
Pvu3g0533 348 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 344 IPR029063 -
Pvu3g0533 348 Gene3D - 3 113 IPR036388 -
Pvu3g0533 348 CDD AdoMet_MTases 187 286 - -
Pvu3g0533 348 Gene3D Vaccinia Virus protein VP39 115 348 IPR029063 -
Pvu3g0533 348 PIRSF O-mtase 4 348 IPR016461 GO:0008168
Pvu3g0533 348 PANTHER O-METHYLTRANSFERASE 5 348 IPR016461 GO:0008168
Pvu3g0533 348 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 5 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0533 Pvu-Chr3 6331367 6332555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0533 28 335 Monolignol Biosynthesis Gene Families AT5G54160 32.515 2.51e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0533 K22588 K13259 gmx:106795493 562.762