Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0522 ATGCGGTGTCATGGCTTAACCGTACACGGAAGCAACCACCGTGGCTTCTGCGTCCCCACCGTGTCTCCGGCGTTCTTGAGACCCACCCGACCCGTCACCCGTATCGCGTTTCCCAAGGCTACTCTGAAGAACGAGGGACTAATGACGGAGTTCAGCTTCTACGAGCTTCTGGGTATACCCGAATCCGGTTCCTTGATGGACATTAAGAACGCGTACAAGCAACTCGCCCGAAAGTACCACCCGGACGTCTCTCCTCCGGGTCGGGTCGAGGAGTACACCAAACGGTTTATTCAGGTGCAGGAAGCCTACGAAACTCTCTCCGATCCTTCCCGAAGAGCCATGTACGATCATGACATGGCCAAGGGCATTAACTTCGCTTTCAACGCCCGCAGACGCCGCAACTACCACGATCAGGTGGTGGAGCAGAAAACTGAATGGAAATCTAGGTGGCAATCTCAACTGTCAGAGCTGAAGAGAAGAAGTAGCAGCAAGGATGGTGGAGGAGGGAACATGTCATGGGCAGCTAGAATGCGCCAGCAGAGGGATGAATTGTCTAATGAATTGCCTAATGAATATTCTAATGAATCATGA 591 0.5262 MRCHGLTVHGSNHRGFCVPTVSPAFLRPTRPVTRIAFPKATLKNEGLMTEFSFYELLGIPESGSLMDIKNAYKQLARKYHPDVSPPGRVEEYTKRFIQVQEAYETLSDPSRRAMYDHDMAKGINFAFNARRRRNYHDQVVEQKTEWKSRWQSQLSELKRRSSSKDGGGGNMSWAARMRQQRDELSNELPNEYSNES* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0522 196 MobiDBLite consensus disorder prediction 152 196 - -
Pvu3g0522 196 Pfam DnaJ domain 53 116 IPR001623 -
Pvu3g0522 196 PRINTS DnaJ domain signature 54 72 IPR001623 -
Pvu3g0522 196 PRINTS DnaJ domain signature 72 87 IPR001623 -
Pvu3g0522 196 PRINTS DnaJ domain signature 91 111 IPR001623 -
Pvu3g0522 196 SMART dnaj_3 51 111 IPR001623 -
Pvu3g0522 196 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 48 185 - -
Pvu3g0522 196 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 48 185 - -
Pvu3g0522 196 ProSiteProfiles dnaJ domain profile. 52 119 IPR001623 -
Pvu3g0522 196 CDD DnaJ 53 108 IPR001623 -
Pvu3g0522 196 ProSitePatterns Nt-dnaJ domain signature. 96 115 IPR018253 -
Pvu3g0522 196 Gene3D DnaJ domain 39 160 IPR036869 -
Pvu3g0522 196 SUPERFAMILY Chaperone J-domain 48 123 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0522 Pvu-Chr3 6128576 6131164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0522 54 116 C2H2 Transcription Factor Family AT1G74250 43.939 2.69e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0522 - - gmx:100101903 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0522 3 6128576 6131164 Pvu3g0522 3 6128576 6131164 ECH