Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0503 ATGCAATCTCTCAAGTCACAACCTGCTTTTTCATCTTCTCTTTTCAATCAATTCTCCTCTCACTGTCTCACATCCTTACTCTCTTTCTCAACCAAATCTCATTGCCTACACTTCAACCAAACCACTTCCATAATTGATTACCTAAATTCCAACTTCCAATTCTCCTCAACCCAATCCCTTTATATTTCGAAATGTGTTTCAAGGGGCAGATTACCTCAAAACTCCTTACCAGTGCTCACTTTTTTAAAAAAAATAGGCTTTTCCCAAACCCAGATTCTCTCTGTGATTCGTCAAAGACCCCAGATACTGTTTACAGATGTTGACAAAATCTTGAGACCCAAAATTCAGTTCTTTCAGCTGTCTGGATTCCAGGGCTGCGAGTTATGCAGCTTCATTTCCAAGAATCCCTCCATTTTGACTCATAGCTTGAAGAAAACCTTGGTCCCCTCAGTTGAAGCTATTAGGAAAATTGTGTGCGATCAGAAAGATTTTCTTCTTGTGTTGCGCAGATGTGGCTGGATACTCCCAAAGTACAAAAGGTTTATGGACAATGTCGTCTTCTTGGAGAGGTGTGGCATTCTTGGGGCTCATCTTGCATTGCTACTCAGACTTCATCCAAGGCTTTTCCTTGCACACCAGTCTACTATTGCAAACAGTGTTTCTCGAGCTGTAGACTTGGGTTTCCGTGAAAATTCAAGAATGTTTGTCCATGCTATTCATACATTAAGTTGTTTGAGTGATAAAACATTTGAGAGAAAGCTGAAACTAATTAATTGTTTTGGGTTTTCCAAGGATGAGGGCTTGCAAATGTTCAAGAGAACCCCGACTTTGTTTAGAACATCAGAGAAGAAGTTGAAAGTTGGAATGGAGTTCTTCTTGCATACAGTTATGCTGCCCAAGTCAGTCCTTGTTCATATGCCTAAGATTTTAATGTACAGTATGGAGGATCGCGTGCTTCCTCGATATAAAGTCTTCCAGTTGTTGAAATCAAAAAATCTTTGCAAGAAAGTCCCCAGTTATATTTATGTGTTGTGCTTGTCTGAGGAGATGTTCTTGGACAAATATATATCACAGTTCAGAGAAAATGCAGAGGAGTTATTAGTAGCATACAAGGGTCACTATCTGGAGGAATAA 1134 0.3959 MQSLKSQPAFSSSLFNQFSSHCLTSLLSFSTKSHCLHFNQTTSIIDYLNSNFQFSSTQSLYISKCVSRGRLPQNSLPVLTFLKKIGFSQTQILSVIRQRPQILFTDVDKILRPKIQFFQLSGFQGCELCSFISKNPSILTHSLKKTLVPSVEAIRKIVCDQKDFLLVLRRCGWILPKYKRFMDNVVFLERCGILGAHLALLLRLHPRLFLAHQSTIANSVSRAVDLGFRENSRMFVHAIHTLSCLSDKTFERKLKLINCFGFSKDEGLQMFKRTPTLFRTSEKKLKVGMEFFLHTVMLPKSVLVHMPKILMYSMEDRVLPRYKVFQLLKSKNLCKKVPSYIYVLCLSEEMFLDKYISQFRENAEELLVAYKGHYLEE* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0503 377 PANTHER CGI-12 PROTEIN-RELATED 29 373 IPR003690 GO:0003690|GO:0006355
Pvu3g0503 377 PANTHER EMB|CAB62602.1 29 373 - -
Pvu3g0503 377 SMART mt_12 300 331 IPR003690 GO:0003690|GO:0006355
Pvu3g0503 377 SMART mt_12 199 229 IPR003690 GO:0003690|GO:0006355
Pvu3g0503 377 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Pvu3g0503 377 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Pvu3g0503 377 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Pvu3g0503 377 Gene3D Transcription termination factor 3, mitochondrial 157 363 IPR038538 -
Pvu3g0503 377 Pfam mTERF 245 351 IPR003690 GO:0003690|GO:0006355
Pvu3g0503 377 Pfam mTERF 79 231 IPR003690 GO:0003690|GO:0006355
Pvu3g0503 377 Pfam mTERF 151 255 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0503 Pvu-Chr3 5874324 5875531 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu3g0503 mTERF 4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0503 K15032 - vvi:100268158 328.561