Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0497 ATGGATTTTTTATTGGAAAATCTTTCAGGGAGTTCTTCTAGTTCTAATCGTTCGAGTGAAATTACAAAAAACGAAACGTTATCAAATCAACAACAAGGTGAAACTCTTGTGAATAAGACGTCGAATCAACAACAAGGTGAAATTCTTATGAATAAGACGCCACATCAAGATATTTTTGAGGAAAATGAGAAGAAAATTGTTATTAGTGAGGAAGGGTCATACGATCTAGAAATTAACGATGAAGTGCATCCATCGATCGAAAGAGGTCGACGGAAGAAAATGAAAGATATGTTTGACGATCTTAGTGGTTTACTTCCACAACTTCCTTCAAAGGTGGATAAAGCAAGCATTGTGAATGAAGCAGTGAACTACATAAAAGTTCTGGAGGAAACCCTGGAAAAGCTAGAGAGAAAGAAGCAAGAAAGGGCAGAAGGTGGTCTGAAACAAATCATGGGAACAACTTCTGGTGCAGTTTCTGTCTCTGGGAAGCAGAAAGTAGCTTTTGATAAAACTTGGGCTGCTTCAAACATGGTGCTCAACATTCAAGGAAATGAAGCTCAATTCTCCATTTGCTCAGTCCATAAGCCAGGACTCATGACCAACATTGCTTCTGTGCTGGAGAAGCACAACATAGAGCTCATTTCTGCCACCATTTCAGCCAATGGAAATGGAAGTACATGCATGATTCAAGTCCATGGAAAACAAGGTTGGGATGAAAATTCAGCAGAGGAAACTTACAGGAAAGCTGCTGAAGAGATTATGCCATTGATCGCTTAA 777 0.3925 MDFLLENLSGSSSSSNRSSEITKNETLSNQQQGETLVNKTSNQQQGEILMNKTPHQDIFEENEKKIVISEEGSYDLEINDEVHPSIERGRRKKMKDMFDDLSGLLPQLPSKVDKASIVNEAVNYIKVLEETLEKLERKKQERAEGGLKQIMGTTSGAVSVSGKQKVAFDKTWAASNMVLNIQGNEAQFSICSVHKPGLMTNIASVLEKHNIELISATISANGNGSTCMIQVHGKQGWDENSAEETYRKAAEEIMPLIA* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0497 258 SUPERFAMILY ACT-like 185 244 IPR045865 -
Pvu3g0497 258 SMART finulus 84 134 IPR011598 GO:0046983
Pvu3g0497 258 Gene3D - 79 149 IPR036638 GO:0046983
Pvu3g0497 258 PANTHER TRANSCRIPTION FACTOR BHLH95 9 255 - -
Pvu3g0497 258 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 141 IPR036638 GO:0046983
Pvu3g0497 258 PANTHER - 9 255 IPR044278 GO:0003700|GO:0006355|GO:0009960
Pvu3g0497 258 CDD ACT_UUR-ACR-like 187 236 - -
Pvu3g0497 258 Pfam Helix-loop-helix DNA-binding domain 82 128 IPR011598 GO:0046983
Pvu3g0497 258 MobiDBLite consensus disorder prediction 1 43 - -
Pvu3g0497 258 Coils Coil 118 145 - -
Pvu3g0497 258 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 78 128 IPR011598 GO:0046983
Pvu3g0497 258 CDD bHLH_AtbHLH_like 83 136 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0497 Pvu-Chr3 5726997 5730941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0497 79 230 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 34.975 9.32e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pvu3g0497 HLH 2.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0497 - - pvu:PHAVU_003G048100g 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0497 3 5726997 5730941 Pvu3g0497 3 5726997 5730941 ECH