Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0481 CCAAAGGAACTTCAGCAGCAATCTAAGGCATCCCTTAAAGGAGATGATGGGAAGAAACTCATTCCAGCAAGGAAGCAGCAGGCATTAATTGTTGCAAGGAGGCCAGACTCTGGTGGCCAAGAAGGAACTGTGATCTCTCTTCTTGCCAACCACTTTTTGGTACAATTTGATCCATCACAAAAGATATATCATTACAATGTTGAAATCACTCCTCATCCCTCCAAGGATATTGCCAGAGCAATCAAGCAGAATTTGGTAAATAACAATTCTGCTGTCCTCTCAGGTGCTATTCCAGCATATGATGGGAGAAAGAATCTCTACAGTCCAGTTGAGTTCCAAAATGATAAGCTAGAGTTCTACATAAGCCTCCCTATCCCCACTAGGAAGCTGGCATCACCCTATGAAGAAATGTCTGACTTGAAAGAGAAGCATGAGCAACTTAAACTTTTCAGGATAAATATTAAATTGGTCTCAAAAATCAATGGAAAGGAGTTGACTAACTACTTGAGCAAAGAGGATGATGACTGGATTCCACTTCCACAGGATTATCTGCATGCTTTGGATGTAGTTCTTAGGGAGAACCCCACTGAGAAATGCATACCTGTTGGAAGGTCATTCTATTCAAGTTCAATGGGAAGAAGCAAAGACATTGGTGGAGGAGCTGTTGGATTGAGAGGCTTCTTTCAGAGTCTTAGACCAACACAACAAGGACTAGCTCTCAATGTGGATTTCTCAGTAACTGCTTTCCATGAGAGCATAGGAGTGATTGCATACCTGCAGAAACGCCTTGAGTTCCTTCGGGACCTTTCTCAGAGGAAGACAGCTCAATTAACTAGTGAAGAGAGGAAGGAAGTGGAGAAAGCATTGAAGAACCTTAGGGTCTTTGTTTGCCATAGGGAAACTGTTCAGAGATACCGTGTCTATGGCTTAACCGAGGAGGCTACTGAAAACCTTTGGTTTGCTGACAGAGATGGGAAGAATCTGAGGCTGGTGAATTACTTTAAAGATCACTATAACTATGACATACAATTCAGAAAATTGCCGTGCTTGCAGATTAGTAGGAGTAAACCTTGTTATCTCCCTATGGAGCTTTGTGTGATCTGTGAAGGCCAAAAGTTCCTTGGAAAGCTGACTGATGATCAAACAGCAAGAATACTCAAAATGGGCTGCCAAAGACCTGGAGAACGAAAAACCACTATTGAAGGAGTCATGAGAGGAAATGTTGGGCCTACCAGTGGTAATCAGGAAAAAGAATTCAAACTCCAAGTCTCAAGAGAAATGACAAAGTTGACTGGCAGAATTCTTTTCCCTCCCAAGCTAAAGCTTGGAGATGGAGGCCATGTTAGAAACCTGACACCCTCGCGCCACGACCGGCAATGGAACCTTCTTGATGGCCATGTCTCTGAAGGAAGTACTATCGAAAGGTGGGCATTAATTAGTTTTGGGGGCACACCTGAGCAGAAGTCCAATGTCCCCAGATTCATAAACCAGTTATCTCAAAGGTGTGAACAATTGGGCATTTTTCTCAATAAGAACACAGTTATTAGTCCCCAGTTTGAATCAAGCCAGATTCTTAATAATGTCACCCTTTTGGAATCTAAGCTCAAGAGGATCCAGAGGACCGCCTCAAACAATCTCCAGCTTCTTATTTGCATAATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAACGAATTGCCGAGACTAGTATTGGTGTAGTGAGCCAATGCTGCCTGTACCCCAATCTCAGCAAATTGAGTTCACAATTTTTGGCTAATCTGGCTCTCAAAATCAATGCCAAAGTCGGTGGATGCACAGTTGCTTTGTACAACTCATTGCCTTCGCAGTTACCACGTCTCTTTCATATTGATGAGCCGGTGATATTCATGGGTGCAGATGTGACACATCCTCACCCTCTTGATGATTTCAGTCCATCTGTTGCTGCTGTTGTCGGTAGCATGAATTGGCCGACAGCAAACAAGTACATTTCAAGAATAAGGTCTCAAACACACAGACAAGAAATCATTCAGGATCTTGGTGCAATGGTGGGGGAATTGCTTGATGATTTTTACCAGGAGGTAGAGAAACTCCCCAGCAGAATCATTTTCTTCAGAGATGGGGTTAGTGAAACTCAGTTTTACAAAGTGTTGGAGGACGAACTTCAGTCAATCAGGTGTGCATGCACAAGGTTTCCTGGTTACAAGCCTTCCATTACTTTTGCAGTTGTGCAAAAGAGGCACCACACAAGGTTGTTTCCCTTTGAAACTGACCAGTCTTCAACTCAAAACCATTTTCTGTATGAAAACATTCCTCCAGGGACTGTGGTTGATTCTGTGATCACTCATCCAAATGAATTTGATTTCTACCTTTGTAGCCATTGGGGTGTGAAAGGAACAAGTAGGCCAACTCACTACCATGTCCTGTGGGATGAAAACCAGTTTACTTCTGATGAACTGCAGAAACTGGTTTACAACTTATGCTACACTTTTGTCAGGTGTACCAAGCCAATTTCTTTGGTTCCTCCTGCCTATTACGCCCATTTAGCTGCATACAGAGGCAGACTCTACCTCGAGAGATCAGAGTCCTTAGGTTTGTTCAGAAGTACATCTACACTGTCCAGAGCTGCTCCTCCAAAGACAGCACCTCTTCCCAAACTTAGTGAAAACATCAAGAAGCTCATGTTCTACTGCTAG 2694 0.4313 PKELQQQSKASLKGDDGKKLIPARKQQALIVARRPDSGGQEGTVISLLANHFLVQFDPSQKIYHYNVEITPHPSKDIARAIKQNLVNNNSAVLSGAIPAYDGRKNLYSPVEFQNDKLEFYISLPIPTRKLASPYEEMSDLKEKHEQLKLFRINIKLVSKINGKELTNYLSKEDDDWIPLPQDYLHALDVVLRENPTEKCIPVGRSFYSSSMGRSKDIGGGAVGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIAYLQKRLEFLRDLSQRKTAQLTSEERKEVEKALKNLRVFVCHRETVQRYRVYGLTEEATENLWFADRDGKNLRLVNYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLTDDQTARILKMGCQRPGERKTTIEGVMRGNVGPTSGNQEKEFKLQVSREMTKLTGRILFPPKLKLGDGGHVRNLTPSRHDRQWNLLDGHVSEGSTIERWALISFGGTPEQKSNVPRFINQLSQRCEQLGIFLNKNTVISPQFESSQILNNVTLLESKLKRIQRTASNNLQLLICIMERKHKGYADLKRIAETSIGVVSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQLPRLFHIDEPVIFMGADVTHPHPLDDFSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGAMVGELLDDFYQEVEKLPSRIIFFRDGVSETQFYKVLEDELQSIRCACTRFPGYKPSITFAVVQKRHHTRLFPFETDQSSTQNHFLYENIPPGTVVDSVITHPNEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRSTSTLSRAAPPKTAPLPKLSENIKKLMFYC* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0481 897 ProSiteProfiles PAZ domain profile. 260 369 IPR003100 GO:0005515
Pvu3g0481 897 CDD Piwi_ago-like 417 857 IPR045246 -
Pvu3g0481 897 SMART DUF1785_2 200 252 IPR014811 -
Pvu3g0481 897 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 12 896 - -
Pvu3g0481 897 PANTHER PROTEIN ARGONAUTE 7 12 896 - -
Pvu3g0481 897 Pfam Piwi domain 549 855 IPR003165 GO:0003676
Pvu3g0481 897 Gene3D paz domain 246 373 - -
Pvu3g0481 897 SMART Piwi_a_2 548 858 IPR003165 GO:0003676
Pvu3g0481 897 Pfam PAZ domain 263 385 IPR003100 GO:0005515
Pvu3g0481 897 SUPERFAMILY Ribonuclease H-like 533 858 IPR012337 -
Pvu3g0481 897 SMART PAZ_2_a_3 260 400 IPR003100 GO:0005515
Pvu3g0481 897 Gene3D - 620 897 IPR036397 GO:0003676
Pvu3g0481 897 ProSiteProfiles Piwi domain profile. 548 858 IPR003165 GO:0003676
Pvu3g0481 897 Gene3D - 434 610 - -
Pvu3g0481 897 SUPERFAMILY PAZ domain 247 405 IPR036085 GO:0005515
Pvu3g0481 897 Pfam Argonaute linker 1 domain 201 250 IPR014811 -
Pvu3g0481 897 CDD PAZ_argonaute_like 263 368 - -
Pvu3g0481 897 Pfam N-terminal domain of argonaute 45 191 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0481 Pvu-Chr3 5538450 5541467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0481 39 897 Eukaryotic Initiation Factors Gene Family AT1G48410 42.076 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0481 K11593 - gmx:100797755 1735.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0481 3 5538450 5541467 Pvu3g0481 3 5538450 5541467 ECH