Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0478 TGGTCAGCCATAGCATCTCACTTGGCCAAGAGAACCGACAATGAGATAAAGAACTATTGGAACACTCACCTCAAGAAAAGGCTCGACAAAATGGGCATAGACCCCACCACCCACAAGCCAAAAATCGACTCCCAAATCCACTTCAAAGACGGTTCAAACCTCAGCCACATGGCTCAGTGGGAGAGTGCTCGGCTCGAAGCCGAAGCCAGACTCGTACGAGAATCCAAGTTGCAAGAACAACACAACCTCGTATTAACCTCTTCCTCACCACCACCACCACAACAACAACCTAGGCTCATTCTCCACAAAATCACACCCCAACACCACCACCACCAACAACAACAACCCTCACTACCACCATGCCTCGACGTGCTCAAAGCATGGCAGAGTTCATGCTCAGACAATAACAACAACAAACACTCATCACTACACGACAGGAAGAAAGCCATGCATGTGCATAGCATGTATGCCATGATGCTTGCCACTGATGACCTTGAATCCCCTACATCCACCTTGTGCTTTCCCGAAAGTCTGCAAATCCATAATAATAATGATAATAATAACAGTAACGTTATGGTGTCGACCAACCAAGTTAGGTTAATGAATGAGAACTATTTACTTCCTCCAACTGGTGTGGAAGAGTTTATGAGCAAAAGTTTAGGAACGTGTGGTGAGGGTGCAACCGTGAAGGAAGATGCTTGTTGTGGCGGTGATGGTGAGAACAGTGAGACGTGGAGGTACTTCACCAAACACGGCACTGATCACGATGAAGAAGTCGCTGAAACTGAGAAGAGAATTATGCAGCTGACGATGCCATGTTTGGAAGATGAGGACATAATGGTGGCTGTTGATGCATTAAGAGGTGGTGGTTATTATGGTAACAATAATGACGATATTAATAATGATGTGGTGGCATTTACACCTCTCTCTAGAAATGTCAACATGGTTGTTGGTTTCAATAACGACCTGCAGGATTTTGATTCCAACCAAGATTTAGCCACCACTGAGAACTTGGAAGTGAACTTCAGGGAGAATAAGGATTATTGGAACAGCATGCTTGGTTATAAGTGA 1071 0.45 WSAIASHLAKRTDNEIKNYWNTHLKKRLDKMGIDPTTHKPKIDSQIHFKDGSNLSHMAQWESARLEAEARLVRESKLQEQHNLVLTSSSPPPPQQQPRLILHKITPQHHHHQQQQPSLPPCLDVLKAWQSSCSDNNNNKHSSLHDRKKAMHVHSMYAMMLATDDLESPTSTLCFPESLQIHNNNDNNNSNVMVSTNQVRLMNENYLLPPTGVEEFMSKSLGTCGEGATVKEDACCGGDGENSETWRYFTKHGTDHDEEVAETEKRIMQLTMPCLEDEDIMVAVDALRGGGYYGNNNDDINNDVVAFTPLSRNVNMVVGFNNDLQDFDSNQDLATTENLEVNFRENKDYWNSMLGYK* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0478 356 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 354 - -
Pvu3g0478 356 Gene3D - 1 50 - -
Pvu3g0478 356 ProSiteProfiles Myb-like domain profile. 1 24 IPR001005 -
Pvu3g0478 356 CDD SANT 1 24 IPR001005 -
Pvu3g0478 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 28 IPR017930 -
Pvu3g0478 356 SUPERFAMILY Homeodomain-like 1 33 IPR009057 -
Pvu3g0478 356 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0478 Pvu-Chr3 5495033 5496175 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0478 1 120 MYB Transcription Factor Family AT5G15310 58.400 2.10e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0478 K09422 - gmx:100792994 405.601