Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0473 ATGGGAAGGAAGGGATGTTGTGAGAAGCTAGGGTTGAAGAAAGGACGATGGACACCAGAAGAAGACAAGAAGCTCCTCGACTACGTTGGGAAGCATGGCCATCGAAACTGGCGTTTAGTGCCTGCCAAAGCGGGTCTTGAAAGATGTGGAAAGAGTTGCAGATTGAGGTGGATTAACTATCTCAAACCTGATATAAAACGAGGAAACTTCAGCACGGAGGAAGACCACACCATTATTCAACTTCATGCTCTTCTTGGAAACAAACTCATCAGAATGAGCTTAGATCCCATTACCATTACCCACAAAACAATAAAACAGAACACATTTGAAGGCTGTGGTGATGGCCAAGACCAGTCCAAGGACACCATCAATATCAGGCACGTGGCTCAGTGGGAGAGGGCCCGATTTGAAGCTGAAGCCAGAGGATCTATGTTGCAAGTTGGATCTGGATCCTCAAATCTCTCTGGGCTAATCTTAAGCAAGATTCCAACTCAACCTTGTCTTTCATCACATTCAGTGTCCACTGAAAACAAGAGAGTGCATAACATGTATGCCCTCGTGCTTACCACAAATCATGATTTTAGGTCATCTGTATCCACTTTGAGCATTACCAAGCTTCCTGCAGTTTCTAATATTCCACAAAACACCAACACAAAAAGTTTACTTGCATATAAGGCTGACAATAATGTCATGGGAGCTAGTACCCAAATTCGAAAGGTAATGGAAGGCTGTGTTTCAAACTTACAAGATGATGATATTATGGTGGCTGTGGAAGCGTTTAGAACAGCAAGGTGTGAGAGTATTGAAGAGCTGTTGAATGAATTTACTTCCATGTAG 837 0.4313 MGRKGCCEKLGLKKGRWTPEEDKKLLDYVGKHGHRNWRLVPAKAGLERCGKSCRLRWINYLKPDIKRGNFSTEEDHTIIQLHALLGNKLIRMSLDPITITHKTIKQNTFEGCGDGQDQSKDTINIRHVAQWERARFEAEARGSMLQVGSGSSNLSGLILSKIPTQPCLSSHSVSTENKRVHNMYALVLTTNHDFRSSVSTLSITKLPAVSNIPQNTNTKSLLAYKADNNVMGASTQIRKVMEGCVSNLQDDDIMVAVEAFRTARCESIEELLNEFTSM* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0473 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 88 187 - -
Pvu3g0473 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 88 - -
Pvu3g0473 278 SUPERFAMILY Homeodomain-like 15 89 IPR009057 -
Pvu3g0473 278 CDD SANT 16 61 IPR001005 -
Pvu3g0473 278 Gene3D - 13 66 - -
Pvu3g0473 278 PANTHER TRANSCRIPTION FACTOR MYB106 88 187 - -
Pvu3g0473 278 PANTHER TRANSCRIPTION FACTOR MYB106 1 88 - -
Pvu3g0473 278 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pvu3g0473 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Pvu3g0473 278 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pvu3g0473 278 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0473 Pvu-Chr3 5376558 5377710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0473 1 169 MYB Transcription Factor Family AT3G01140 47.000 2.00e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu3g0473 Myb_DNA-binding 2.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0473 K09422 - gmx:100790887 362.073