Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0472 ATGGGAAGGAAGGCATGTTGTGAGAAGCTAGGGTTGAAGAAAGGACGATGGACACCAGAAGAAGACAAGAAGCTCCTCGACTACGTTGAAAAGCATGGCCATCGAAACTGGCGTTTAGTGCCTGCCAAAGCGG 133 0.5038 MGRKACCEKLGLKKGRWTPEEDKKLLDYVEKHGHRNWRLVPAKA 44
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0472 44 Pfam Myb-like DNA-binding domain 14 42 IPR001005 -
Pvu3g0472 44 PANTHER TRANSCRIPTION FACTOR MYB51 1 44 - -
Pvu3g0472 44 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 44 - -
Pvu3g0472 44 ProSiteProfiles Myb-like domain profile. 9 44 IPR001005 -
Pvu3g0472 44 SUPERFAMILY Homeodomain-like 8 42 IPR009057 -
Pvu3g0472 44 Gene3D - 11 44 - -
Pvu3g0472 44 CDD SANT 16 43 IPR001005 -
Pvu3g0472 44 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 44 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0472 Pvu-Chr3 5286165 5286297 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0472 1 44 MYB Transcription Factor Family AT5G15310 70.455 4.59e-18 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0472 K09422 - pvu:PHAVU_003G0459000 100.523